STRINGSTRING
tdk tdk AKN33191.1 AKN33191.1 AKN32349.1 AKN32349.1 AKN31604.1 AKN31604.1 cmk cmk AKN30280.1 AKN30280.1 pyrH pyrH gmk gmk udk udk adk adk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tdkThymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
AKN33191.1Thymidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
AKN32349.1Topology modulation protein; In Listeria monocytogenes this protein binds a specific sites on DNA, influencing the topology and transcription; regulates flaA, proU and ompC; is osmoregulated; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
AKN31604.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
cmkCytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
AKN30280.1Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
pyrHUridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (237 aa)
gmkGuanylate kinase; Essential for recycling GMP and indirectly, cGMP. (209 aa)
udkUridine kinase; Functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (217 aa)
Your Current Organism:
Clostridium carboxidivorans
NCBI taxonomy Id: 536227
Other names: C. carboxidivorans P7, Clostridium carboxidivorans P7, Clostridium carboxidivorans str. P7, Clostridium carboxidivorans strain P7
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