STRINGSTRING
AKN34112.1 AKN34112.1 AKN29535.1 AKN29535.1 AKN32592.1 AKN32592.1 AKN31814.1 AKN31814.1 AKN30068.1 AKN30068.1 glgB glgB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKN34112.1Fibronectin; Derived by automated computational analysis using gene prediction method: Protein Homology. (1431 aa)
AKN29535.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (643 aa)
AKN32592.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
AKN31814.1Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
AKN30068.1Fibronectin; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
glgB1,4-alpha-glucan branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (676 aa)
Your Current Organism:
Clostridium carboxidivorans
NCBI taxonomy Id: 536227
Other names: C. carboxidivorans P7, Clostridium carboxidivorans P7, Clostridium carboxidivorans str. P7, Clostridium carboxidivorans strain P7
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