STRINGSTRING
EEG30058.1 EEG30058.1 EEG30059.1 EEG30059.1 EEG30061.1 EEG30061.1 EEG30062.1 EEG30062.1 tnpX tnpX EEG30064.1 EEG30064.1 repA repA EEG30066.1 EEG30066.1 EEG30067.1 EEG30067.1 EEG29714.1 EEG29714.1 EEG29715.1 EEG29715.1 EEG29716.1 EEG29716.1 EEG29717.1 EEG29717.1 EEG28895.1 EEG28895.1 EEG28896.1 EEG28896.1 EEG28897.1 EEG28897.1 EEG28898.1 EEG28898.1 EEG28899.1 EEG28899.1 EEG28900.1 EEG28900.1 EEG28901.1 EEG28901.1 EEG28902.1 EEG28902.1 repA-2 repA-2 EEG28904.1 EEG28904.1 EEG28905.1 EEG28905.1 EEG28907.1 EEG28907.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EEG30058.1Sigma-70, region 4; Psort location: Cytoplasmic, score: 8.87. (152 aa)
EEG30059.1Hypothetical protein. (67 aa)
EEG30061.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75. (83 aa)
EEG30062.1Putative TnpX site-specific recombinase; Psort location: Cytoplasmic, score: 8.87. (368 aa)
tnpXTnpX site-specific recombinase. (173 aa)
EEG30064.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (81 aa)
repAReplication initiator protein A domain protein; Psort location: Cytoplasmic, score: 8.87. (108 aa)
EEG30066.1Hypothetical protein. (72 aa)
EEG30067.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (111 aa)
EEG29714.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (67 aa)
EEG29715.1Sigma-70, region 4; Psort location: Cytoplasmic, score: 8.87. (152 aa)
EEG29716.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (41 aa)
EEG29717.1MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 9.99. (487 aa)
EEG28895.1KEGG: tte:TTE2296 1.0e-67 fusA; translation elongation and release factors (GTPases) K02355; Psort location: Cytoplasmic, score: 9.65. (639 aa)
EEG28896.1Methyltransferase domain protein; KEGG: bcz:BCZK2527 1.2e-10 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87. (255 aa)
EEG28897.1Sigma-70, region 4; Psort location: Cytoplasmic, score: 8.87. (140 aa)
EEG28898.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (70 aa)
EEG28899.1Hypothetical protein; KEGG: rde:RD1_A0111 0.0039 virD1; VirD1; Psort location: Cytoplasmic, score: 8.87. (244 aa)
EEG28900.1Hypothetical protein. (92 aa)
EEG28901.1Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.87. (541 aa)
EEG28902.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (128 aa)
repA-2Replication initiator protein A domain protein. (264 aa)
EEG28904.1IstB-like ATP-binding protein; KEGG: spi:MGAS10750_Spy1680 1.3e-42 replicative DNA helicase K01529; Psort location: Cytoplasmic, score: 8.87. (280 aa)
EEG28905.1Hypothetical protein. (64 aa)
EEG28907.1Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.87. (538 aa)
Your Current Organism:
Clostridium methylpentosum
NCBI taxonomy Id: 537013
Other names: Clostridium methylpentosum ATCC 43829, Clostridium methylpentosum DSM 5476, Clostridium methylpentosum R2, [. methylpentosum DSM 5476, [Clostridium] methylpentosum DSM 5476
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