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EEG28899.1 EEG28899.1 EEG28901.1 EEG28901.1 EEG28902.1 EEG28902.1 repA-2 repA-2 EEG28904.1 EEG28904.1 EEG28905.1 EEG28905.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EEG28899.1Hypothetical protein; KEGG: rde:RD1_A0111 0.0039 virD1; VirD1; Psort location: Cytoplasmic, score: 8.87. (244 aa)
EEG28901.1Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.87. (541 aa)
EEG28902.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (128 aa)
repA-2Replication initiator protein A domain protein. (264 aa)
EEG28904.1IstB-like ATP-binding protein; KEGG: spi:MGAS10750_Spy1680 1.3e-42 replicative DNA helicase K01529; Psort location: Cytoplasmic, score: 8.87. (280 aa)
EEG28905.1Hypothetical protein. (64 aa)
Your Current Organism:
Clostridium methylpentosum
NCBI taxonomy Id: 537013
Other names: Clostridium methylpentosum ATCC 43829, Clostridium methylpentosum DSM 5476, Clostridium methylpentosum R2, [. methylpentosum DSM 5476, [Clostridium] methylpentosum DSM 5476
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