STRINGSTRING
GCA_001696535_01645 GCA_001696535_01645 GCA_001696535_01646 GCA_001696535_01646 GCA_001696535_01748 GCA_001696535_01748 GCA_001696535_02132 GCA_001696535_02132 GCA_001696535_02133 GCA_001696535_02133 GCA_001696535_02134 GCA_001696535_02134 GCA_001696535_02496 GCA_001696535_02496 GCA_001696535_02497 GCA_001696535_02497 GCA_001696535_03333 GCA_001696535_03333 GCA_001696535_03890 GCA_001696535_03890
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001696535_01645Unannotated protein. (600 aa)
GCA_001696535_01646Unannotated protein. (451 aa)
GCA_001696535_01748Unannotated protein. (520 aa)
GCA_001696535_02132Unannotated protein. (467 aa)
GCA_001696535_02133Unannotated protein. (709 aa)
GCA_001696535_02134Unannotated protein. (451 aa)
GCA_001696535_02496Unannotated protein. (644 aa)
GCA_001696535_02497Unannotated protein. (469 aa)
GCA_001696535_03333Unannotated protein. (642 aa)
GCA_001696535_03890Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (529 aa)
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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