STRINGSTRING
GCA_001696535_00022 GCA_001696535_00022 GCA_001696535_00179 GCA_001696535_00179 GCA_001696535_00636 GCA_001696535_00636 GCA_001696535_00731 GCA_001696535_00731 GCA_001696535_00832 GCA_001696535_00832 GCA_001696535_02186 GCA_001696535_02186 GCA_001696535_02379 GCA_001696535_02379 GCA_001696535_02509 GCA_001696535_02509 GCA_001696535_02831 GCA_001696535_02831 GCA_001696535_02834 GCA_001696535_02834 GCA_001696535_02863 GCA_001696535_02863 GCA_001696535_02944 GCA_001696535_02944 GCA_001696535_03225 GCA_001696535_03225 GCA_001696535_03338 GCA_001696535_03338 GCA_001696535_03479 GCA_001696535_03479 GCA_001696535_03666 GCA_001696535_03666 GCA_001696535_03879 GCA_001696535_03879 GCA_001696535_04479 GCA_001696535_04479
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001696535_00022Unannotated protein; Belongs to the LysR transcriptional regulatory family. (296 aa)
GCA_001696535_00179Unannotated protein; Belongs to the LysR transcriptional regulatory family. (313 aa)
GCA_001696535_00636Unannotated protein. (312 aa)
GCA_001696535_00731Unannotated protein; Belongs to the LysR transcriptional regulatory family. (297 aa)
GCA_001696535_00832Unannotated protein; Belongs to the LysR transcriptional regulatory family. (304 aa)
GCA_001696535_02186Unannotated protein; Belongs to the LysR transcriptional regulatory family. (308 aa)
GCA_001696535_02379Unannotated protein; Belongs to the LysR transcriptional regulatory family. (302 aa)
GCA_001696535_02509Unannotated protein; Belongs to the LysR transcriptional regulatory family. (295 aa)
GCA_001696535_02831Unannotated protein; Belongs to the LysR transcriptional regulatory family. (299 aa)
GCA_001696535_02834Unannotated protein; Belongs to the LysR transcriptional regulatory family. (303 aa)
GCA_001696535_02863Unannotated protein; Belongs to the LysR transcriptional regulatory family. (301 aa)
GCA_001696535_02944Unannotated protein; Belongs to the LysR transcriptional regulatory family. (299 aa)
GCA_001696535_03225Unannotated protein; Belongs to the LysR transcriptional regulatory family. (320 aa)
GCA_001696535_03338Unannotated protein; Belongs to the LysR transcriptional regulatory family. (309 aa)
GCA_001696535_03479Unannotated protein; Belongs to the LysR transcriptional regulatory family. (350 aa)
GCA_001696535_03666Unannotated protein; Belongs to the LysR transcriptional regulatory family. (314 aa)
GCA_001696535_03879Unannotated protein; Belongs to the LysR transcriptional regulatory family. (309 aa)
GCA_001696535_04479Unannotated protein; Belongs to the LysR transcriptional regulatory family. (307 aa)
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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