STRINGSTRING
GCA_001696535_04029 GCA_001696535_04029 GCA_001696535_03863 GCA_001696535_03863 GCA_001696535_03838 GCA_001696535_03838 GCA_001696535_03833 GCA_001696535_03833 gyrB gyrB GCA_001696535_03530 GCA_001696535_03530 GCA_001696535_03183 GCA_001696535_03183 GCA_001696535_02366 GCA_001696535_02366 GCA_001696535_02283 GCA_001696535_02283 GCA_001696535_02228 GCA_001696535_02228 GCA_001696535_02153 GCA_001696535_02153 GCA_001696535_02133 GCA_001696535_02133 GCA_001696535_02125 GCA_001696535_02125 GCA_001696535_02049 GCA_001696535_02049 htpG htpG GCA_001696535_01817 GCA_001696535_01817 GCA_001696535_01816 GCA_001696535_01816 GCA_001696535_01695 GCA_001696535_01695 GCA_001696535_01645 GCA_001696535_01645 GCA_001696535_01513 GCA_001696535_01513 GCA_001696535_01391 GCA_001696535_01391 GCA_001696535_01141 GCA_001696535_01141 GCA_001696535_01118 GCA_001696535_01118 GCA_001696535_03083 GCA_001696535_03083 GCA_001696535_00533 GCA_001696535_00533 parE parE GCA_001696535_00262 GCA_001696535_00262 GCA_001696535_00260 GCA_001696535_00260 GCA_001696535_00014 GCA_001696535_00014 GCA_001696535_03134 GCA_001696535_03134 GCA_001696535_03169 GCA_001696535_03169 GCA_001696535_03179 GCA_001696535_03179 GCA_001696535_04514 GCA_001696535_04514 GCA_001696535_04553 GCA_001696535_04553 GCA_001696535_00781 GCA_001696535_00781 GCA_001696535_02804 GCA_001696535_02804 GCA_001696535_02801 GCA_001696535_02801 GCA_001696535_02713 GCA_001696535_02713 mutL mutL GCA_001696535_02505 GCA_001696535_02505 GCA_001696535_02496 GCA_001696535_02496 GCA_001696535_02483 GCA_001696535_02483 GCA_001696535_04145 GCA_001696535_04145
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001696535_04029Unannotated protein. (479 aa)
GCA_001696535_03863Unannotated protein. (906 aa)
GCA_001696535_03838Unannotated protein. (840 aa)
GCA_001696535_03833Unannotated protein. (613 aa)
gyrBUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (817 aa)
GCA_001696535_03530Unannotated protein. (455 aa)
GCA_001696535_03183Unannotated protein. (785 aa)
GCA_001696535_02366Unannotated protein. (523 aa)
GCA_001696535_02283Unannotated protein. (450 aa)
GCA_001696535_02228Unannotated protein. (335 aa)
GCA_001696535_02153Unannotated protein. (534 aa)
GCA_001696535_02133Unannotated protein. (709 aa)
GCA_001696535_02125Unannotated protein. (576 aa)
GCA_001696535_02049Unannotated protein. (671 aa)
htpGUnannotated protein; Molecular chaperone. Has ATPase activity. (644 aa)
GCA_001696535_01817Unannotated protein. (214 aa)
GCA_001696535_01816Unannotated protein. (920 aa)
GCA_001696535_01695Unannotated protein. (646 aa)
GCA_001696535_01645Unannotated protein. (600 aa)
GCA_001696535_01513Unannotated protein. (475 aa)
GCA_001696535_01391Unannotated protein. (715 aa)
GCA_001696535_01141Unannotated protein. (824 aa)
GCA_001696535_01118Unannotated protein. (474 aa)
GCA_001696535_03083Unannotated protein. (493 aa)
GCA_001696535_00533Unannotated protein. (477 aa)
parEUnannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (687 aa)
GCA_001696535_00262Unannotated protein. (371 aa)
GCA_001696535_00260Unannotated protein. (739 aa)
GCA_001696535_00014Unannotated protein. (522 aa)
GCA_001696535_03134Unannotated protein. (615 aa)
GCA_001696535_03169Unannotated protein. (477 aa)
GCA_001696535_03179Unannotated protein. (476 aa)
GCA_001696535_04514Unannotated protein. (781 aa)
GCA_001696535_04553Unannotated protein. (466 aa)
GCA_001696535_00781Unannotated protein. (357 aa)
GCA_001696535_02804Unannotated protein. (391 aa)
GCA_001696535_02801Unannotated protein. (1176 aa)
GCA_001696535_02713Unannotated protein. (469 aa)
mutLUnannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (624 aa)
GCA_001696535_02505Unannotated protein. (326 aa)
GCA_001696535_02496Unannotated protein. (644 aa)
GCA_001696535_02483Unannotated protein. (1434 aa)
GCA_001696535_04145Unannotated protein. (403 aa)
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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