(10 nodes) Mixed, incl. Benzoate degradation, and acetyl-CoA carboxylase complex network (Thermococcus chitonophagus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CUX77864.1	Metal-dependent hydrolase. (189 aa)
	CUX77866.1	Endoribonuclease L-PSP. (126 aa)
	CUX77868.1	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain. (522 aa)
	CUX77869.1	Methylmalonyl-CoA decarboxylase, gamma chain. (124 aa)
	CUX77870.1	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase. (146 aa)
	CUX77871.1	Methylmalonyl-CoA decarboxylase, beta chain. (400 aa)
	CUX77872.1	NADP-dependent malic enzyme. (432 aa)
	CUX77873.1	Hypothetical protein. (84 aa)
	CUX78696.1	Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase alpha subunit. (273 aa)
	CUX78697.1	Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase beta subunit. (164 aa)

Your Current Organism:

Thermococcus chitonophagus

NCBI taxonomy Id: 54262
Other names: DSM 10152, T. chitonophagus, strain GC74

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUX77864.1	CUX77871.1	CHITON_1085	CHITON_1092	Metal-dependent hydrolase.	Methylmalonyl-CoA decarboxylase, beta chain.	0.800
CUX77864.1	CUX77872.1	CHITON_1085	CHITON_1093	Metal-dependent hydrolase.	NADP-dependent malic enzyme.	0.802
CUX77864.1	CUX78696.1	CHITON_1085	CHITON_1917	Metal-dependent hydrolase.	Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase alpha subunit.	0.803
CUX77864.1	CUX78697.1	CHITON_1085	CHITON_1918	Metal-dependent hydrolase.	Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase beta subunit.	0.800
CUX77866.1	CUX77868.1	CHITON_1087	CHITON_1089	Endoribonuclease L-PSP.	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	0.455
CUX77866.1	CUX77869.1	CHITON_1087	CHITON_1090	Endoribonuclease L-PSP.	Methylmalonyl-CoA decarboxylase, gamma chain.	0.416
CUX77866.1	CUX77870.1	CHITON_1087	CHITON_1091	Endoribonuclease L-PSP.	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase.	0.484
CUX77866.1	CUX77871.1	CHITON_1087	CHITON_1092	Endoribonuclease L-PSP.	Methylmalonyl-CoA decarboxylase, beta chain.	0.431
CUX77868.1	CUX77866.1	CHITON_1089	CHITON_1087	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	Endoribonuclease L-PSP.	0.455
CUX77868.1	CUX77869.1	CHITON_1089	CHITON_1090	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	Methylmalonyl-CoA decarboxylase, gamma chain.	0.811
CUX77868.1	CUX77870.1	CHITON_1089	CHITON_1091	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase.	0.939
CUX77868.1	CUX77871.1	CHITON_1089	CHITON_1092	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	Methylmalonyl-CoA decarboxylase, beta chain.	0.816
CUX77868.1	CUX77872.1	CHITON_1089	CHITON_1093	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	NADP-dependent malic enzyme.	0.649
CUX77868.1	CUX77873.1	CHITON_1089	CHITON_1094	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	Hypothetical protein.	0.430
CUX77869.1	CUX77866.1	CHITON_1090	CHITON_1087	Methylmalonyl-CoA decarboxylase, gamma chain.	Endoribonuclease L-PSP.	0.416
CUX77869.1	CUX77868.1	CHITON_1090	CHITON_1089	Methylmalonyl-CoA decarboxylase, gamma chain.	Methylmalonyl-CoA decarboxylase, alpha chain; Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain.	0.811
CUX77869.1	CUX77870.1	CHITON_1090	CHITON_1091	Methylmalonyl-CoA decarboxylase, gamma chain.	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase.	0.984
CUX77869.1	CUX77871.1	CHITON_1090	CHITON_1092	Methylmalonyl-CoA decarboxylase, gamma chain.	Methylmalonyl-CoA decarboxylase, beta chain.	0.994
CUX77869.1	CUX77872.1	CHITON_1090	CHITON_1093	Methylmalonyl-CoA decarboxylase, gamma chain.	NADP-dependent malic enzyme.	0.618
CUX77869.1	CUX77873.1	CHITON_1090	CHITON_1094	Methylmalonyl-CoA decarboxylase, gamma chain.	Hypothetical protein.	0.436