(5 nodes) Specific amino acids and opine-binding periplasmic protein, ABC transporter, and Amino acid ABC transporter, permease protein, 3-TM domain network (Raoultella ornithinolytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

Your Input:
	artJ_2	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
	artM	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	artQ_2	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	artI	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
	artP-2	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)

Your Current Organism:

Raoultella ornithinolytica

NCBI taxonomy Id: 54291
Other names: ATCC 31898, CCUG 26769, CIP 103364, CIP 103576, DSM 7464, JCM 6096, Klebsiella ornithinolytica, Klebsiella sp. Yangling I2, NBRC 105727, NIH 90-72, R. ornithinolytica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
artI	artJ_2	TE10_10200	TE10_10185	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.947
artI	artM	TE10_10200	TE10_10190	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
artI	artP-2	TE10_10200	TE10_10205	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
artI	artQ_2	TE10_10200	TE10_10195	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
artJ_2	artI	TE10_10185	TE10_10200	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.947
artJ_2	artM	TE10_10185	TE10_10190	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
artJ_2	artP-2	TE10_10185	TE10_10205	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
artJ_2	artQ_2	TE10_10185	TE10_10195	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
artM	artI	TE10_10190	TE10_10200	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.992
artM	artJ_2	TE10_10190	TE10_10185	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.979
artM	artP-2	TE10_10190	TE10_10205	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
artM	artQ_2	TE10_10190	TE10_10195	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
artP-2	artI	TE10_10205	TE10_10200	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.994
artP-2	artJ_2	TE10_10205	TE10_10185	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.981
artP-2	artM	TE10_10205	TE10_10190	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
artP-2	artQ_2	TE10_10205	TE10_10195	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
artQ_2	artI	TE10_10195	TE10_10200	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.996
artQ_2	artJ_2	TE10_10195	TE10_10185	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.989
artQ_2	artM	TE10_10195	TE10_10190	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
artQ_2	artP-2	TE10_10195	TE10_10205	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987

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