20 items (Trichomalopsis sarcophagae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TSAR_010385	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (72 aa)
	TSAR_007812	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1089 aa)
	TSAR_011137	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1490 aa)
	TSAR_002556	Uncharacterized protein. (69 aa)
	TSAR_000396	LMWPc domain-containing protein. (199 aa)
	TSAR_002557	WD_REPEATS_REGION domain-containing protein. (455 aa)
	TSAR_007582	WD_REPEATS_REGION domain-containing protein. (349 aa)
	TSAR_003163	WD_REPEATS_REGION domain-containing protein. (373 aa)
	TSAR_014495	Uncharacterized protein. (93 aa)
	TSAR_005638	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1115 aa)
	TSAR_015235	Uncharacterized protein. (149 aa)
	TSAR_015237	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family. (854 aa)
	TSAR_015714	G_PROTEIN_RECEP_F3_4 domain-containing protein. (1717 aa)
	TSAR_016566	Uncharacterized protein. (299 aa)
	TSAR_016565	Uncharacterized protein. (164 aa)
	TSAR_000537	G_PROTEIN_RECEP_F3_4 domain-containing protein. (1143 aa)
	TSAR_016568	Uncharacterized protein. (662 aa)
	TSAR_016567	Uncharacterized protein. (646 aa)
	TSAR_001676	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (685 aa)
	TSAR_004668	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1441 aa)

Your Current Organism:

Trichomalopsis sarcophagae

NCBI taxonomy Id: 543379
Other names: T. sarcophagae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TSAR_000396	TSAR_002556	A0A232FDK2	A0A232FDN9	LMWPc domain-containing protein.	Uncharacterized protein.	0.519
TSAR_000396	TSAR_002557	A0A232FDK2	A0A232FDB8	LMWPc domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.519
TSAR_000396	TSAR_003163	A0A232FDK2	A0A232FA63	LMWPc domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.515
TSAR_000396	TSAR_004668	A0A232FDK2	A0A232EWU7	LMWPc domain-containing protein.	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	0.657
TSAR_000396	TSAR_007582	A0A232FDK2	A0A232FBT3	LMWPc domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.519
TSAR_000396	TSAR_010385	A0A232FDK2	A0A232EMH1	LMWPc domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.580
TSAR_000537	TSAR_002556	A0A232EUJ6	A0A232FDN9	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.669
TSAR_000537	TSAR_002557	A0A232EUJ6	A0A232FDB8	G_PROTEIN_RECEP_F3_4 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.669
TSAR_000537	TSAR_003163	A0A232EUJ6	A0A232FA63	G_PROTEIN_RECEP_F3_4 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.635
TSAR_000537	TSAR_007582	A0A232EUJ6	A0A232FBT3	G_PROTEIN_RECEP_F3_4 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.669
TSAR_000537	TSAR_010385	A0A232EUJ6	A0A232EMH1	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.716
TSAR_000537	TSAR_015237	A0A232EUJ6	A0A232F408	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein; Belongs to the G-protein coupled receptor 3 family.	0.834
TSAR_000537	TSAR_015714	A0A232EUJ6	A0A232F0L8	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.982
TSAR_000537	TSAR_016565	A0A232EUJ6	A0A232EUH5	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.544
TSAR_000537	TSAR_016566	A0A232EUJ6	A0A232EUF6	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.544
TSAR_000537	TSAR_016567	A0A232EUJ6	A0A232EUK4	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.544
TSAR_000537	TSAR_016568	A0A232EUJ6	A0A232EUK1	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.544
TSAR_001676	TSAR_002556	A0A232EVC5	A0A232FDN9	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Uncharacterized protein.	0.523
TSAR_001676	TSAR_002557	A0A232EVC5	A0A232FDB8	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	WD_REPEATS_REGION domain-containing protein.	0.523
TSAR_001676	TSAR_003163	A0A232EVC5	A0A232FA63	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	WD_REPEATS_REGION domain-containing protein.	0.515