10 items (beta proteobacterium CB) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D521_0760	NUDIX hydrolase. (200 aa)
	D521_0761	Hypothetical protein. (175 aa)
	D521_0762	Extracellular solute-binding protein family 3. (250 aa)
	D521_0763	Polar amino acid ABC transporter, inner membrane subunit. (217 aa)
	D521_0764	ABC transporter related protein. (243 aa)
	D521_0765	Polar amino acid ABC transporter, inner membrane subunit. (221 aa)
	D521_1608	GntR family transcriptional regulator. (213 aa)
	D521_1834	Extracellular solute-binding protein. (263 aa)
	prs	Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (322 aa)
	D521_2044	Extracellular solute-binding protein family 3. (250 aa)

Your Current Organism:

beta proteobacterium CB

NCBI taxonomy Id: 543913
Other names: b. proteobacterium CB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D521_0760	D521_0761	D521_0760	D521_0761	NUDIX hydrolase.	Hypothetical protein.	0.630
D521_0760	D521_0762	D521_0760	D521_0762	NUDIX hydrolase.	Extracellular solute-binding protein family 3.	0.430
D521_0760	D521_0763	D521_0760	D521_0763	NUDIX hydrolase.	Polar amino acid ABC transporter, inner membrane subunit.	0.404
D521_0760	prs	D521_0760	D521_1917	NUDIX hydrolase.	Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.	0.904
D521_0761	D521_0760	D521_0761	D521_0760	Hypothetical protein.	NUDIX hydrolase.	0.630
D521_0761	D521_0762	D521_0761	D521_0762	Hypothetical protein.	Extracellular solute-binding protein family 3.	0.551
D521_0761	D521_0763	D521_0761	D521_0763	Hypothetical protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.456
D521_0762	D521_0760	D521_0762	D521_0760	Extracellular solute-binding protein family 3.	NUDIX hydrolase.	0.430
D521_0762	D521_0761	D521_0762	D521_0761	Extracellular solute-binding protein family 3.	Hypothetical protein.	0.551
D521_0762	D521_0763	D521_0762	D521_0763	Extracellular solute-binding protein family 3.	Polar amino acid ABC transporter, inner membrane subunit.	0.943
D521_0762	D521_0764	D521_0762	D521_0764	Extracellular solute-binding protein family 3.	ABC transporter related protein.	0.914
D521_0762	D521_0765	D521_0762	D521_0765	Extracellular solute-binding protein family 3.	Polar amino acid ABC transporter, inner membrane subunit.	0.930
D521_0762	D521_1834	D521_0762	D521_1834	Extracellular solute-binding protein family 3.	Extracellular solute-binding protein.	0.758
D521_0763	D521_0760	D521_0763	D521_0760	Polar amino acid ABC transporter, inner membrane subunit.	NUDIX hydrolase.	0.404
D521_0763	D521_0761	D521_0763	D521_0761	Polar amino acid ABC transporter, inner membrane subunit.	Hypothetical protein.	0.456
D521_0763	D521_0762	D521_0763	D521_0762	Polar amino acid ABC transporter, inner membrane subunit.	Extracellular solute-binding protein family 3.	0.943
D521_0763	D521_0764	D521_0763	D521_0764	Polar amino acid ABC transporter, inner membrane subunit.	ABC transporter related protein.	0.988
D521_0763	D521_0765	D521_0763	D521_0765	Polar amino acid ABC transporter, inner membrane subunit.	Polar amino acid ABC transporter, inner membrane subunit.	0.971
D521_0763	D521_1834	D521_0763	D521_1834	Polar amino acid ABC transporter, inner membrane subunit.	Extracellular solute-binding protein.	0.841
D521_0763	D521_2044	D521_0763	D521_2044	Polar amino acid ABC transporter, inner membrane subunit.	Extracellular solute-binding protein family 3.	0.851