(50 nodes) Nuclear pore, and RND3 GTPase cycle network (Histoplasma capsulatum H88)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_01345	Protein transporter SEC13; Belongs to the WD repeat SEC13 family. (400 aa)
	HCEG_01472	Nuclear envelope protein. (673 aa)
	HCEG_00742	Uncharacterized protein. (1476 aa)
	HCEG_00841	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family. (378 aa)
	HCEG_00886	Uncharacterized protein. (1359 aa)
	HCEG_00972	ATP-dependent RNA helicase DBP5; Belongs to the DEAD box helicase family. (497 aa)
	HCEG_01980	WW domain-containing protein. (1229 aa)
	HCEG_02153	Nucleoporin nup44. (465 aa)
	HCEG_02195	Uncharacterized protein. (1385 aa)
	HCEG_02427	Nucleoporin SONB. (2000 aa)
	HCEG_02544	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1065 aa)
	HCEG_02585	RNA export mediator Gle1. (536 aa)
	HCEG_02702	Ran GTPase activating protein. (470 aa)
	HCEG_03745	Ran-specific GTPase-activating protein. (261 aa)
	HCEG_03746	Uncharacterized protein. (839 aa)
	HCEG_04049	Uncharacterized protein. (2553 aa)
	HCEG_04188	CCCH zinc finger domain-containing protein. (524 aa)
	HCEG_04189	ELYS domain-containing protein. (342 aa)
	HCEG_04220	Nucleoporin Pom152. (1259 aa)
	HCEG_04429	Uncharacterized protein. (453 aa)
	HCEG_04430	C-x8-C-x5-C-x3-H zinc finger protein. (677 aa)
	HCEG_05563	Small G-protein Gsp1p. (331 aa)
	HCEG_04729	Pheromone response pathway component SRM1. (552 aa)
	HCEG_04733	Meiotically up-regulated gene 87 protein. (1080 aa)
	HCEG_05673	Nuclear pore complex subunit Nup159. (1473 aa)
	HCEG_05763	Uncharacterized protein. (514 aa)
	HCEG_05041	cAMP-dependent protein kinase pathway protein. (780 aa)
	HCEG_05075	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1109 aa)
	HCEG_05951	Predicted protein. (144 aa)
	HCEG_05183	Nucleoporin nsp1. (692 aa)
	HCEG_05391	Uncharacterized protein. (174 aa)
	HCEG_04590	Nuclear membrane protein. (460 aa)
	HCEG_06422	Uncharacterized protein. (78 aa)
	HCEG_06423	Uncharacterized protein. (117 aa)
	HCEG_06516	Nucleoporin. (1844 aa)
	HCEG_06940	Uncharacterized protein. (363 aa)
	HCEG_06151	DUF1996 domain-containing protein. (108 aa)
	HCEG_06154	Uncharacterized protein. (151 aa)
	HCEG_07049	Uncharacterized protein. (176 aa)
	HCEG_06306	Uncharacterized protein. (817 aa)
	HCEG_07468	Predicted protein. (353 aa)
	HCEG_07803	Nuclear protein export protein Yrb2. (789 aa)
	HCEG_07955	Nuclear pore complex subunit Nup133. (1332 aa)
	HCEG_07962	Exportin. (1069 aa)
	HCEG_07994	Poly(A)+ RNA export protein. (362 aa)
	HCEG_08014	Uncharacterized protein. (797 aa)
	HCEG_08285	Uncharacterized protein. (247 aa)
	HCEG_08352	Uncharacterized protein. (247 aa)
	HCEG_08933	Filament-forming protein. (2038 aa)
	HCEG_09219	Nucleoporin NUP49/NSP49. (499 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00742	HCEG_00841	F0U5T5	F0U6E3	Uncharacterized protein.	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	0.612
HCEG_00742	HCEG_00886	F0U5T5	F0U6U5	Uncharacterized protein.	Uncharacterized protein.	0.594
HCEG_00742	HCEG_01345	F0U5T5	F0U4N6	Uncharacterized protein.	Protein transporter SEC13; Belongs to the WD repeat SEC13 family.	0.623
HCEG_00742	HCEG_02153	F0U5T5	F0UAS2	Uncharacterized protein.	Nucleoporin nup44.	0.480
HCEG_00742	HCEG_02427	F0U5T5	F0UCB2	Uncharacterized protein.	Nucleoporin SONB.	0.564
HCEG_00742	HCEG_02544	F0U5T5	F0UCQ3	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.628
HCEG_00742	HCEG_02585	F0U5T5	F0UCU4	Uncharacterized protein.	RNA export mediator Gle1.	0.402
HCEG_00742	HCEG_03745	F0U5T5	F0UE00	Uncharacterized protein.	Ran-specific GTPase-activating protein.	0.485
HCEG_00742	HCEG_03746	F0U5T5	F0UE01	Uncharacterized protein.	Uncharacterized protein.	0.485
HCEG_00742	HCEG_04189	F0U5T5	F0UFM2	Uncharacterized protein.	ELYS domain-containing protein.	0.558
HCEG_00742	HCEG_04733	F0U5T5	F0UI62	Uncharacterized protein.	Meiotically up-regulated gene 87 protein.	0.592
HCEG_00742	HCEG_05075	F0U5T5	F0UK20	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.624
HCEG_00742	HCEG_05183	F0U5T5	F0UKL4	Uncharacterized protein.	Nucleoporin nsp1.	0.582
HCEG_00742	HCEG_05673	F0U5T5	F0UIW1	Uncharacterized protein.	Nuclear pore complex subunit Nup159.	0.469
HCEG_00742	HCEG_05763	F0U5T5	F0UJA3	Uncharacterized protein.	Uncharacterized protein.	0.564
HCEG_00742	HCEG_06940	F0U5T5	F0UP73	Uncharacterized protein.	Uncharacterized protein.	0.469
HCEG_00742	HCEG_07803	F0U5T5	F0URR1	Uncharacterized protein.	Nuclear protein export protein Yrb2.	0.485
HCEG_00742	HCEG_07955	F0U5T5	F0US63	Uncharacterized protein.	Nuclear pore complex subunit Nup133.	0.624
HCEG_00742	HCEG_07994	F0U5T5	F0USA2	Uncharacterized protein.	Poly(A)+ RNA export protein.	0.461
HCEG_00742	HCEG_08933	F0U5T5	F0UUZ1	Uncharacterized protein.	Filament-forming protein.	0.489