(6 nodes) 7S RNA binding network (Histoplasma capsulatum H88)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_03719	SRP9-21 domain-containing protein. (186 aa)
	HCEG_03279	Signal recognition particle SEC65 subunit. (261 aa)
	HCEG_04156	Uncharacterized protein. (135 aa)
	HCEG_07236	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (671 aa)
	HCEG_06295	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (527 aa)
	HCEG_08872	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (647 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_03279	HCEG_03719	F0UF52	F0UDT1	Signal recognition particle SEC65 subunit.	SRP9-21 domain-containing protein.	0.985
HCEG_03279	HCEG_04156	F0UF52	F0UFD7	Signal recognition particle SEC65 subunit.	Uncharacterized protein.	0.999
HCEG_03279	HCEG_06295	F0UF52	F0UQ82	Signal recognition particle SEC65 subunit.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.999
HCEG_03279	HCEG_07236	F0UF52	F0ULS3	Signal recognition particle SEC65 subunit.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.999
HCEG_03279	HCEG_08872	F0UF52	F0UUT0	Signal recognition particle SEC65 subunit.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.999
HCEG_03719	HCEG_03279	F0UDT1	F0UF52	SRP9-21 domain-containing protein.	Signal recognition particle SEC65 subunit.	0.985
HCEG_03719	HCEG_04156	F0UDT1	F0UFD7	SRP9-21 domain-containing protein.	Uncharacterized protein.	0.999
HCEG_03719	HCEG_06295	F0UDT1	F0UQ82	SRP9-21 domain-containing protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.999
HCEG_03719	HCEG_07236	F0UDT1	F0ULS3	SRP9-21 domain-containing protein.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.999
HCEG_03719	HCEG_08872	F0UDT1	F0UUT0	SRP9-21 domain-containing protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.999
HCEG_04156	HCEG_03279	F0UFD7	F0UF52	Uncharacterized protein.	Signal recognition particle SEC65 subunit.	0.999
HCEG_04156	HCEG_03719	F0UFD7	F0UDT1	Uncharacterized protein.	SRP9-21 domain-containing protein.	0.999
HCEG_04156	HCEG_06295	F0UFD7	F0UQ82	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.999
HCEG_04156	HCEG_07236	F0UFD7	F0ULS3	Uncharacterized protein.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.999
HCEG_04156	HCEG_08872	F0UFD7	F0UUT0	Uncharacterized protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.999
HCEG_06295	HCEG_03279	F0UQ82	F0UF52	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Signal recognition particle SEC65 subunit.	0.999
HCEG_06295	HCEG_03719	F0UQ82	F0UDT1	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	SRP9-21 domain-containing protein.	0.999
HCEG_06295	HCEG_04156	F0UQ82	F0UFD7	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.999
HCEG_06295	HCEG_07236	F0UQ82	F0ULS3	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.999
HCEG_06295	HCEG_08872	F0UQ82	F0UUT0	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.999