(7 nodes) Rough endoplasmic reticulum network (Histoplasma capsulatum H88)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_01014	Translocation complex subunit Sss1. (70 aa)
	HCEG_03995	F-box domain-containing protein. (214 aa)
	HCEG_04141	Protein transporter SEC61 alpha subunit. (479 aa)
	HCEG_03530	Translocation protein sec63. (699 aa)
	HCEG_05503	Translocon protein Sec61beta. (164 aa)
	HCEG_05725	Translocation protein sec62. (377 aa)
	HCEG_06602	Translocation protein. (259 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_01014	HCEG_03530	F0U839	F0UGG2	Translocation complex subunit Sss1.	Translocation protein sec63.	0.953
HCEG_01014	HCEG_03995	F0U839	F0UEQ0	Translocation complex subunit Sss1.	F-box domain-containing protein.	0.981
HCEG_01014	HCEG_04141	F0U839	F0UFC2	Translocation complex subunit Sss1.	Protein transporter SEC61 alpha subunit.	0.999
HCEG_01014	HCEG_05503	F0U839	F0UHS9	Translocation complex subunit Sss1.	Translocon protein Sec61beta.	0.998
HCEG_01014	HCEG_05725	F0U839	F0UJ65	Translocation complex subunit Sss1.	Translocation protein sec62.	0.980
HCEG_01014	HCEG_06602	F0U839	F0UMS0	Translocation complex subunit Sss1.	Translocation protein.	0.978
HCEG_03530	HCEG_01014	F0UGG2	F0U839	Translocation protein sec63.	Translocation complex subunit Sss1.	0.953
HCEG_03530	HCEG_03995	F0UGG2	F0UEQ0	Translocation protein sec63.	F-box domain-containing protein.	0.990
HCEG_03530	HCEG_04141	F0UGG2	F0UFC2	Translocation protein sec63.	Protein transporter SEC61 alpha subunit.	0.967
HCEG_03530	HCEG_05503	F0UGG2	F0UHS9	Translocation protein sec63.	Translocon protein Sec61beta.	0.951
HCEG_03530	HCEG_05725	F0UGG2	F0UJ65	Translocation protein sec63.	Translocation protein sec62.	0.996
HCEG_03530	HCEG_06602	F0UGG2	F0UMS0	Translocation protein sec63.	Translocation protein.	0.990
HCEG_03995	HCEG_01014	F0UEQ0	F0U839	F-box domain-containing protein.	Translocation complex subunit Sss1.	0.981
HCEG_03995	HCEG_03530	F0UEQ0	F0UGG2	F-box domain-containing protein.	Translocation protein sec63.	0.990
HCEG_03995	HCEG_04141	F0UEQ0	F0UFC2	F-box domain-containing protein.	Protein transporter SEC61 alpha subunit.	0.951
HCEG_03995	HCEG_05503	F0UEQ0	F0UHS9	F-box domain-containing protein.	Translocon protein Sec61beta.	0.929
HCEG_03995	HCEG_05725	F0UEQ0	F0UJ65	F-box domain-containing protein.	Translocation protein sec62.	0.980
HCEG_03995	HCEG_06602	F0UEQ0	F0UMS0	F-box domain-containing protein.	Translocation protein.	0.990
HCEG_04141	HCEG_01014	F0UFC2	F0U839	Protein transporter SEC61 alpha subunit.	Translocation complex subunit Sss1.	0.999
HCEG_04141	HCEG_03530	F0UFC2	F0UGG2	Protein transporter SEC61 alpha subunit.	Translocation protein sec63.	0.967