15 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_01493	Cell morphogenesis protein Sog2. (983 aa)
	HCEG_01099	Predicted protein. (223 aa)
	HCEG_02886	Conidiophore development protein hymA. (395 aa)
	HCEG_02984	C2H2 transcription factor. (681 aa)
	HCEG_02333	Serine/threonine protein kinase cot-1. (649 aa)
	HCEG_03178	Serine/threonine protein kinase. (704 aa)
	HCEG_03808	Pps1 dual specificity phosphatase. (683 aa)
	HCEG_05681	Serine/threonine protein kinase cbk1. (960 aa)
	HCEG_05750	Protein kinase. (218 aa)
	HCEG_06092	Serine/threonine protein kinase. (607 aa)
	HCEG_06933	Predicted protein. (121 aa)
	HCEG_06934	Transcriptional activator leucine zipper. (2542 aa)
	HCEG_08017	Uncharacterized protein. (332 aa)
	HCEG_09125	Serine/threonine protein kinase sid2. (659 aa)
	HCEG_09194	Tyrosine-protein phosphatase CDC14. (411 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_01099	HCEG_01493	F0U8I7	F0U5J4	Predicted protein.	Cell morphogenesis protein Sog2.	0.435
HCEG_01099	HCEG_02333	F0U8I7	F0UBW5	Predicted protein.	Serine/threonine protein kinase cot-1.	0.423
HCEG_01099	HCEG_03178	F0U8I7	F0UC17	Predicted protein.	Serine/threonine protein kinase.	0.526
HCEG_01099	HCEG_05681	F0U8I7	F0UIW9	Predicted protein.	Serine/threonine protein kinase cbk1.	0.423
HCEG_01099	HCEG_05750	F0U8I7	F0UJ90	Predicted protein.	Protein kinase.	0.496
HCEG_01099	HCEG_06092	F0U8I7	F0UP18	Predicted protein.	Serine/threonine protein kinase.	0.526
HCEG_01099	HCEG_08017	F0U8I7	F0USC5	Predicted protein.	Uncharacterized protein.	0.496
HCEG_01099	HCEG_09125	F0U8I7	F0UVI3	Predicted protein.	Serine/threonine protein kinase sid2.	0.423
HCEG_01099	HCEG_09194	F0U8I7	F0UVQ2	Predicted protein.	Tyrosine-protein phosphatase CDC14.	0.508
HCEG_01493	HCEG_01099	F0U5J4	F0U8I7	Cell morphogenesis protein Sog2.	Predicted protein.	0.435
HCEG_01493	HCEG_02333	F0U5J4	F0UBW5	Cell morphogenesis protein Sog2.	Serine/threonine protein kinase cot-1.	0.653
HCEG_01493	HCEG_02886	F0U5J4	F0UAA9	Cell morphogenesis protein Sog2.	Conidiophore development protein hymA.	0.743
HCEG_01493	HCEG_02984	F0U5J4	F0UAW2	Cell morphogenesis protein Sog2.	C2H2 transcription factor.	0.585
HCEG_01493	HCEG_03178	F0U5J4	F0UC17	Cell morphogenesis protein Sog2.	Serine/threonine protein kinase.	0.895
HCEG_01493	HCEG_05681	F0U5J4	F0UIW9	Cell morphogenesis protein Sog2.	Serine/threonine protein kinase cbk1.	0.556
HCEG_01493	HCEG_05750	F0U5J4	F0UJ90	Cell morphogenesis protein Sog2.	Protein kinase.	0.446
HCEG_01493	HCEG_06092	F0U5J4	F0UP18	Cell morphogenesis protein Sog2.	Serine/threonine protein kinase.	0.895
HCEG_01493	HCEG_08017	F0U5J4	F0USC5	Cell morphogenesis protein Sog2.	Uncharacterized protein.	0.446
HCEG_01493	HCEG_09125	F0U5J4	F0UVI3	Cell morphogenesis protein Sog2.	Serine/threonine protein kinase sid2.	0.431
HCEG_02333	HCEG_01099	F0UBW5	F0U8I7	Serine/threonine protein kinase cot-1.	Predicted protein.	0.423