20 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_03674	Small nuclear ribonucleoprotein Sm D2. (187 aa)
	HCEG_08957	Pre-mRNA-splicing factor Rse1. (1209 aa)
	HCEG_07508	Splicing factor 3B. (387 aa)
	HCEG_07484	Splicing factor 3B. (577 aa)
	HCEG_07072	Splicing factor Sap114. (581 aa)
	HCEG_06874	Sm domain-containing protein. (90 aa)
	HCEG_06696	Small nuclear ribonucleoprotein U2. (266 aa)
	HCEG_06482	RNA binding domain-containing protein. (276 aa)
	HCEG_05295	Splicing factor 3B. (1227 aa)
	HCEG_04807	Sm domain-containing protein. (228 aa)
	HCEG_05598	Pre-mRNA branch site protein p14. (115 aa)
	HCEG_05510	Multiple RNA-binding domain-containing protein. (801 aa)
	HCEG_04279	Cell cycle control protein. (148 aa)
	HCEG_03908	Small nuclear ribonucleoprotein G. (78 aa)
	HCEG_02551	Nuclear mRNA splicing factor-associated protein. (414 aa)
	HCEG_02334	Splicing factor 3A. (236 aa)
	HCEG_03016	Pre-mRNA-splicing factor Ini1. (110 aa)
	HCEG_00390	Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
	HCEG_00324	CID domain-containing protein. (836 aa)
	HCEG_00890	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (113 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00324	HCEG_00890	F0U8W0	F0U6U9	CID domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.858
HCEG_00324	HCEG_02334	F0U8W0	F0UBW6	CID domain-containing protein.	Splicing factor 3A.	0.909
HCEG_00324	HCEG_03016	F0U8W0	F0UB47	CID domain-containing protein.	Pre-mRNA-splicing factor Ini1.	0.978
HCEG_00324	HCEG_03674	F0U8W0	F0UHB2	CID domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.764
HCEG_00324	HCEG_03908	F0U8W0	F0UEG3	CID domain-containing protein.	Small nuclear ribonucleoprotein G.	0.831
HCEG_00324	HCEG_04807	F0U8W0	F0UII7	CID domain-containing protein.	Sm domain-containing protein.	0.647
HCEG_00324	HCEG_05295	F0U8W0	F0UKX6	CID domain-containing protein.	Splicing factor 3B.	0.905
HCEG_00324	HCEG_05598	F0U8W0	F0UID1	CID domain-containing protein.	Pre-mRNA branch site protein p14.	0.707
HCEG_00324	HCEG_06696	F0U8W0	F0UN14	CID domain-containing protein.	Small nuclear ribonucleoprotein U2.	0.983
HCEG_00324	HCEG_06874	F0U8W0	F0UNV5	CID domain-containing protein.	Sm domain-containing protein.	0.805
HCEG_00324	HCEG_07072	F0U8W0	F0UPW2	CID domain-containing protein.	Splicing factor Sap114.	0.788
HCEG_00324	HCEG_07484	F0U8W0	F0UQU2	CID domain-containing protein.	Splicing factor 3B.	0.775
HCEG_00324	HCEG_07508	F0U8W0	F0UQW6	CID domain-containing protein.	Splicing factor 3B.	0.743
HCEG_00324	HCEG_08957	F0U8W0	F0UV15	CID domain-containing protein.	Pre-mRNA-splicing factor Rse1.	0.815
HCEG_00390	HCEG_00890	F0U978	F0U6U9	Splicing factor subunit; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.988
HCEG_00390	HCEG_02334	F0U978	F0UBW6	Splicing factor subunit; Belongs to the SF3B5 family.	Splicing factor 3A.	0.996
HCEG_00390	HCEG_02551	F0U978	F0UCR0	Splicing factor subunit; Belongs to the SF3B5 family.	Nuclear mRNA splicing factor-associated protein.	0.648
HCEG_00390	HCEG_03016	F0U978	F0UB47	Splicing factor subunit; Belongs to the SF3B5 family.	Pre-mRNA-splicing factor Ini1.	0.999
HCEG_00390	HCEG_03674	F0U978	F0UHB2	Splicing factor subunit; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein Sm D2.	0.991
HCEG_00390	HCEG_03908	F0U978	F0UEG3	Splicing factor subunit; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein G.	0.986