STRINGSTRING
HCEG_03025 HCEG_03025 HCEG_08742 HCEG_08742 HCEG_08570 HCEG_08570 PAN2 PAN2 HCEG_06286 HCEG_06286 HCEG_07040 HCEG_07040 HCEG_07035 HCEG_07035 HCEG_05980 HCEG_05980 HCEG_06774 HCEG_06774 HCEG_05087 HCEG_05087 HCEG_03680 HCEG_03680 HCEG_03999 HCEG_03999 USB1 USB1 HCEG_02583 HCEG_02583 HCEG_03196 HCEG_03196 HCEG_03053 HCEG_03053 HCEG_03011 HCEG_03011 HCEG_00170 HCEG_00170 HCEG_00038 HCEG_00038 HCEG_01679 HCEG_01679 HCEG_01630 HCEG_01630 HCEG_00708 HCEG_00708 HCEG_01470 HCEG_01470 HCEG_00626 HCEG_00626
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCEG_03025Endonuclease/exonuclease/phosphatase. (299 aa)
HCEG_08742F-box domain-containing protein. (416 aa)
HCEG_08570Endonuclease/exonuclease/phosphatase. (330 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1190 aa)
HCEG_06286Uncharacterized protein. (557 aa)
HCEG_07040Endo/exonuclease/phosphatase domain-containing protein. (636 aa)
HCEG_07035Predicted protein. (266 aa)
HCEG_05980Double-strand break repair protein; Belongs to the MRE11/RAD32 family. (1016 aa)
HCEG_06774RNA exonuclease. (324 aa)
HCEG_05087Mitochondrial exoribonuclease Cyt-4. (1007 aa)
HCEG_03680DNA polymerase gamma. (1146 aa)
HCEG_03999CCR4-NOT transcription complex. (511 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (330 aa)
HCEG_02583Cell wall biogenesis protein phosphatase Ssd1. (1382 aa)
HCEG_031963'-5' exonuclease/helicase. (935 aa)
HCEG_03053DNA polymerase. (1111 aa)
HCEG_03011CAF1 family ribonuclease. (522 aa)
HCEG_00170Oligoribonuclease. (189 aa)
HCEG_00038Exonuclease. (782 aa)
HCEG_01679DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2232 aa)
HCEG_01630Exosome complex exonuclease RRP6. (807 aa)
HCEG_00708Glucose-repressible alcohol dehydrogenase. (769 aa)
HCEG_01470Hydrolase. (299 aa)
HCEG_00626Mitotic control protein dis3; Belongs to the RNR ribonuclease family. (1037 aa)
Your Current Organism:
Histoplasma capsulatum H88
NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88
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