35 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_00763	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer. (934 aa)
	HCEG_00790	C-x8-C-x5-C-x3-H zinc finger protein. (582 aa)
	HCEG_01606	cAMP-dependent protein kinase regulatory subunit. (448 aa)
	HCEG_01607	Uncharacterized protein. (377 aa)
	HCEG_00196	ATG11 domain-containing protein. (1303 aa)
	HCEG_00260	Meiotically up-regulated gene 80 protein. (472 aa)
	HCEG_00299	Uncharacterized protein. (198 aa)
	HCEG_01224	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (2783 aa)
	HCEG_01254	Cyclin. (315 aa)
	HCEG_01979	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (937 aa)
	HCEG_01993	Protein kinase. (402 aa)
	HCEG_02069	DnaJ and TPR domain-containing protein. (525 aa)
	HCEG_02104	ZZ type zinc finger domain-containing protein. (846 aa)
	HCEG_02922	DUF1168 domain-containing protein. (201 aa)
	HCEG_03101	C-x8-C-x5-C-x3-H zinc finger protein. (475 aa)
	HCEG_03238	Pho85 cyclin. (589 aa)
	HCEG_03262	BTB/POZ domain-containing protein. (627 aa)
	HCEG_05491	Leucine rich repeat domain-containing protein. (806 aa)
	HCEG_05562	Cyclin. (395 aa)
	HCEG_05105	FYVE zinc finger protein. (679 aa)
	HCEG_05217	Uncharacterized protein. (693 aa)
	HCEG_06371	Uncharacterized protein. (2519 aa)
	HCEG_07192	Mucin. (694 aa)
	HCEG_07258	Uncharacterized protein. (493 aa)
	HCEG_07306	Cyclin-dependent protein kinase. (409 aa)
	HCEG_06575	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (113 aa)
	HCEG_06882	Rho3 GTPase. (281 aa)
	HCEG_06970	Uncharacterized protein. (617 aa)
	HCEG_07124	Uncharacterized protein. (207 aa)
	HCEG_00667	Phosphotransmitter protein Ypd1. (161 aa)
	HCEG_07602	Snf1 kinase complex beta-subunit Gal83. (552 aa)
	HCEG_08243	Cyclin. (824 aa)
	HCEG_08716	Predicted protein. (216 aa)
	HCEG_01515	Rho1 GTPase. (192 aa)
	HCEG_01570	CBS domain-containing protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family. (540 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00299	HCEG_01515	F0U8N2	F0U5L6	Uncharacterized protein.	Rho1 GTPase.	0.736
HCEG_00299	HCEG_01570	F0U8N2	F0U5X3	Uncharacterized protein.	CBS domain-containing protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.541
HCEG_00299	HCEG_01606	F0U8N2	F0U661	Uncharacterized protein.	cAMP-dependent protein kinase regulatory subunit.	0.591
HCEG_00299	HCEG_05491	F0U8N2	F0UHR7	Uncharacterized protein.	Leucine rich repeat domain-containing protein.	0.584
HCEG_00299	HCEG_06371	F0U8N2	F0ULK2	Uncharacterized protein.	Uncharacterized protein.	0.550
HCEG_00299	HCEG_06882	F0U8N2	F0UNW3	Uncharacterized protein.	Rho3 GTPase.	0.759
HCEG_00299	HCEG_07124	F0U8N2	F0UQ66	Uncharacterized protein.	Uncharacterized protein.	0.525
HCEG_00299	HCEG_07258	F0U8N2	F0ULZ9	Uncharacterized protein.	Uncharacterized protein.	0.671
HCEG_00763	HCEG_01224	F0U610	F0U9C0	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.914
HCEG_00763	HCEG_01606	F0U610	F0U661	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	cAMP-dependent protein kinase regulatory subunit.	0.437
HCEG_00763	HCEG_05491	F0U610	F0UHR7	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	Leucine rich repeat domain-containing protein.	0.431
HCEG_00763	HCEG_06371	F0U610	F0ULK2	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	Uncharacterized protein.	0.749
HCEG_00790	HCEG_01570	F0U637	F0U5X3	C-x8-C-x5-C-x3-H zinc finger protein.	CBS domain-containing protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.860
HCEG_01224	HCEG_00763	F0U9C0	F0U610	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	0.914
HCEG_01515	HCEG_00299	F0U5L6	F0U8N2	Rho1 GTPase.	Uncharacterized protein.	0.736
HCEG_01515	HCEG_01570	F0U5L6	F0U5X3	Rho1 GTPase.	CBS domain-containing protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.541
HCEG_01515	HCEG_01606	F0U5L6	F0U661	Rho1 GTPase.	cAMP-dependent protein kinase regulatory subunit.	0.591
HCEG_01515	HCEG_05491	F0U5L6	F0UHR7	Rho1 GTPase.	Leucine rich repeat domain-containing protein.	0.584
HCEG_01515	HCEG_06371	F0U5L6	F0ULK2	Rho1 GTPase.	Uncharacterized protein.	0.550
HCEG_01515	HCEG_06882	F0U5L6	F0UNW3	Rho1 GTPase.	Rho3 GTPase.	0.919