33 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_04902	Cell cycle control protein. (598 aa)
	HCEG_05722	Uncharacterized protein. (719 aa)
	HCEG_05750	Protein kinase. (218 aa)
	HCEG_05432	UDP-N-acetylglucosaminyltransferase. (1696 aa)
	HCEG_06376	Uncharacterized protein. (269 aa)
	HCEG_07301	C-type cyclin. (395 aa)
	HCEG_06575	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (113 aa)
	HCEG_06829	TRAF-type zinc finger protein. (474 aa)
	HCEG_07404	ATP-dependent Clp protease ATP-binding subunit clpX. (621 aa)
	HCEG_08661	G1/S regulator. (676 aa)
	HCEG_08183	Cell division control protein. (301 aa)
	HCEG_08017	Uncharacterized protein. (332 aa)
	HCEG_07942	SWIRM domain-containing protein. (316 aa)
	HCEG_01506	Ubiquitin conjugation factor E4. (1058 aa)
	HCEG_01554	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	HCEG_00763	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer. (934 aa)
	HCEG_00807	CDK-activating kinase assembly factor MAT1. (379 aa)
	HCEG_01739	WD40 repeat-containing protein. (1400 aa)
	HCEG_01773	Metal homeostatis protein bsd2. (363 aa)
	HCEG_01787	DNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1234 aa)
	HCEG_00196	ATG11 domain-containing protein. (1303 aa)
	HCEG_00264	Cyclin; Belongs to the cyclin family. (672 aa)
	HCEG_01224	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (2783 aa)
	HCEG_02886	Conidiophore development protein hymA. (395 aa)
	HCEG_02998	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (236 aa)
	HCEG_02474	WD40 repeat-containing protein. (903 aa)
	HCEG_04533	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (485 aa)
	HCEG_03958	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (474 aa)
	HCEG_04161	Plus3 domain-containing protein. (638 aa)
	HCEG_03497	WD40 repeat-containing protein. (616 aa)
	HCEG_04424	Mitotic spindle checkpoint component mad2. (229 aa)
	HCEG_04526	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (450 aa)
	HCEG_05558	Rap guanine nucleotide exchange factor 5. (979 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00196	HCEG_01739	F0U812	F0U706	ATG11 domain-containing protein.	WD40 repeat-containing protein.	0.930
HCEG_00196	HCEG_02474	F0U812	F0UCI3	ATG11 domain-containing protein.	WD40 repeat-containing protein.	0.401
HCEG_00196	HCEG_03497	F0U812	F0UGC9	ATG11 domain-containing protein.	WD40 repeat-containing protein.	0.401
HCEG_00196	HCEG_04161	F0U812	F0UFE2	ATG11 domain-containing protein.	Plus3 domain-containing protein.	0.520
HCEG_00196	HCEG_04902	F0U812	F0UJ38	ATG11 domain-containing protein.	Cell cycle control protein.	0.401
HCEG_00264	HCEG_00807	F0U8E4	F0U6A9	Cyclin; Belongs to the cyclin family.	CDK-activating kinase assembly factor MAT1.	0.872
HCEG_00264	HCEG_02474	F0U8E4	F0UCI3	Cyclin; Belongs to the cyclin family.	WD40 repeat-containing protein.	0.464
HCEG_00264	HCEG_03497	F0U8E4	F0UGC9	Cyclin; Belongs to the cyclin family.	WD40 repeat-containing protein.	0.464
HCEG_00264	HCEG_04161	F0U8E4	F0UFE2	Cyclin; Belongs to the cyclin family.	Plus3 domain-containing protein.	0.424
HCEG_00264	HCEG_04902	F0U8E4	F0UJ38	Cyclin; Belongs to the cyclin family.	Cell cycle control protein.	0.464
HCEG_00264	HCEG_06376	F0U8E4	F0ULK7	Cyclin; Belongs to the cyclin family.	Uncharacterized protein.	0.647
HCEG_00264	HCEG_07301	F0U8E4	F0UM94	Cyclin; Belongs to the cyclin family.	C-type cyclin.	0.834
HCEG_00763	HCEG_01224	F0U610	F0U9C0	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.914
HCEG_00763	HCEG_01554	F0U610	F0U5V7	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.994
HCEG_00763	HCEG_06829	F0U610	F0UNK9	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	TRAF-type zinc finger protein.	0.574
HCEG_00807	HCEG_00264	F0U6A9	F0U8E4	CDK-activating kinase assembly factor MAT1.	Cyclin; Belongs to the cyclin family.	0.872
HCEG_00807	HCEG_02474	F0U6A9	F0UCI3	CDK-activating kinase assembly factor MAT1.	WD40 repeat-containing protein.	0.618
HCEG_00807	HCEG_03497	F0U6A9	F0UGC9	CDK-activating kinase assembly factor MAT1.	WD40 repeat-containing protein.	0.618
HCEG_00807	HCEG_04902	F0U6A9	F0UJ38	CDK-activating kinase assembly factor MAT1.	Cell cycle control protein.	0.618
HCEG_00807	HCEG_05722	F0U6A9	F0UJ62	CDK-activating kinase assembly factor MAT1.	Uncharacterized protein.	0.647