STRINGSTRING
HCEG_00245 HCEG_00245 HCEG_01075 HCEG_01075 HCEG_01103 HCEG_01103 HCEG_02999 HCEG_02999 HCEG_03224 HCEG_03224 HCEG_02561 HCEG_02561 RPS0 RPS0 HCEG_03818 HCEG_03818 HCEG_03827 HCEG_03827 HCEG_03832 HCEG_03832 HCEG_03884 HCEG_03884 HCEG_04001 HCEG_04001 TIF6 TIF6 HCEG_04202 HCEG_04202 HCEG_04281 HCEG_04281 HCEG_03546 HCEG_03546 HCEG_04391 HCEG_04391 HCEG_03628 HCEG_03628 HCEG_03634 HCEG_03634 HCEG_04462 HCEG_04462 HCEG_05475 HCEG_05475 HCEG_05510 HCEG_05510 HCEG_05636 HCEG_05636 HCEG_05846 HCEG_05846 HCEG_05049 HCEG_05049 HCEG_05240 HCEG_05240 HCEG_06633 HCEG_06633 HCEG_06773 HCEG_06773 HCEG_06774 HCEG_06774 HCEG_06205 HCEG_06205 HCEG_07115 HCEG_07115 HCEG_07393 HCEG_07393 HCEG_07407 HCEG_07407 HCEG_07768 HCEG_07768 HCEG_08113 HCEG_08113 HCEG_08218 HCEG_08218 HCEG_08378 HCEG_08378 HCEG_08897 HCEG_08897
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCEG_00245Ribosome biogenesis protein Ssf2. (410 aa)
HCEG_01075Ribosomal RNA processing protein RRP5. (1817 aa)
HCEG_01103Eukaryotic translation initiation factor 5. (429 aa)
HCEG_0299960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (194 aa)
HCEG_03224Predicted protein. (69 aa)
HCEG_0256160S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (204 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (296 aa)
HCEG_0381840S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (218 aa)
HCEG_03827Uncharacterized protein. (459 aa)
HCEG_03832CCCH zinc finger domain-containing protein. (722 aa)
HCEG_03884Ribosome biogenesis protein RPF2. (383 aa)
HCEG_04001Ribosome assembly protein SQT1. (522 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (258 aa)
HCEG_04202Matrix protein. (478 aa)
HCEG_0428160S ribosomal protein. (153 aa)
HCEG_0354640S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (214 aa)
HCEG_04391Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family. (380 aa)
HCEG_03628Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (243 aa)
HCEG_03634Translocation elongation factor. (1039 aa)
HCEG_04462Uncharacterized protein. (364 aa)
HCEG_0547560S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (311 aa)
HCEG_05510Multiple RNA-binding domain-containing protein. (801 aa)
HCEG_05636Ribosomal L10 protein. (223 aa)
HCEG_05846Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4936 aa)
HCEG_05049Meiotic recombination protein DMC1. (323 aa)
HCEG_05240Ribosomal protein S16. (147 aa)
HCEG_06633Mitochondrial ribosome small subunit component S19; Belongs to the universal ribosomal protein uS19 family. (105 aa)
HCEG_06773Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (441 aa)
HCEG_06774RNA exonuclease. (324 aa)
HCEG_06205Periodic tryptophan protein. (929 aa)
HCEG_0711540S ribosomal protein S27. (82 aa)
HCEG_07393Ribosome biogenesis protein BRX1. (382 aa)
HCEG_07407F-box domain-containing protein. (380 aa)
HCEG_0776840S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
HCEG_08113Large subunit GTPase. (680 aa)
HCEG_0821860S ribosomal protein. (588 aa)
HCEG_08378WD40 repeat-containing protein. (515 aa)
HCEG_0889730S ribosomal protein S7. (418 aa)
Your Current Organism:
Histoplasma capsulatum H88
NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.