13 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_05751	ATP synthase subunit 5. (229 aa)
	HCEG_07762	Integral membrane protein. (402 aa)
	HCEG_07820	Uncharacterized protein. (72 aa)
	HCEG_12007	ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family. (74 aa)
	HCEG_12014	ATP synthase subunit a. (256 aa)
	HCEG_06769	Mitochondrial F1F0 ATP synthase subunit F Atp17. (101 aa)
	HCEG_12015	ATP synthase subunit 8. (48 aa)
	HCEG_01724	Uncharacterized protein. (61 aa)
	HCEG_00161	Uncharacterized protein. (166 aa)
	HCEG_03848	Uncharacterized protein. (96 aa)
	HCEG_03950	ATP synthase subunit 4. (244 aa)
	HCEG_03952	Uncharacterized protein. (415 aa)
	HCEG_03302	ATP synthase subunit G. (179 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00161	HCEG_01724	F0U7X7	F0U6Z1	Uncharacterized protein.	Uncharacterized protein.	0.941
HCEG_00161	HCEG_03302	F0U7X7	F0UF75	Uncharacterized protein.	ATP synthase subunit G.	0.602
HCEG_00161	HCEG_03848	F0U7X7	F0UEA3	Uncharacterized protein.	Uncharacterized protein.	0.611
HCEG_00161	HCEG_03950	F0U7X7	F0UEK5	Uncharacterized protein.	ATP synthase subunit 4.	0.978
HCEG_00161	HCEG_03952	F0U7X7	F0UEK7	Uncharacterized protein.	Uncharacterized protein.	0.485
HCEG_00161	HCEG_05751	F0U7X7	F0UJ91	Uncharacterized protein.	ATP synthase subunit 5.	0.952
HCEG_00161	HCEG_06769	F0U7X7	F0UN96	Uncharacterized protein.	Mitochondrial F1F0 ATP synthase subunit F Atp17.	0.984
HCEG_00161	HCEG_12007	F0U7X7	F0UWE4	Uncharacterized protein.	ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family.	0.927
HCEG_00161	HCEG_12014	F0U7X7	F0UWF1	Uncharacterized protein.	ATP synthase subunit a.	0.927
HCEG_00161	HCEG_12015	F0U7X7	F0UWF2	Uncharacterized protein.	ATP synthase subunit 8.	0.927
HCEG_01724	HCEG_00161	F0U6Z1	F0U7X7	Uncharacterized protein.	Uncharacterized protein.	0.941
HCEG_01724	HCEG_03302	F0U6Z1	F0UF75	Uncharacterized protein.	ATP synthase subunit G.	0.697
HCEG_01724	HCEG_03848	F0U6Z1	F0UEA3	Uncharacterized protein.	Uncharacterized protein.	0.701
HCEG_01724	HCEG_03950	F0U6Z1	F0UEK5	Uncharacterized protein.	ATP synthase subunit 4.	0.985
HCEG_01724	HCEG_03952	F0U6Z1	F0UEK7	Uncharacterized protein.	Uncharacterized protein.	0.925
HCEG_01724	HCEG_05751	F0U6Z1	F0UJ91	Uncharacterized protein.	ATP synthase subunit 5.	0.727
HCEG_01724	HCEG_06769	F0U6Z1	F0UN96	Uncharacterized protein.	Mitochondrial F1F0 ATP synthase subunit F Atp17.	0.981
HCEG_01724	HCEG_07762	F0U6Z1	F0URM0	Uncharacterized protein.	Integral membrane protein.	0.912
HCEG_01724	HCEG_07820	F0U6Z1	F0URS8	Uncharacterized protein.	Uncharacterized protein.	0.818
HCEG_01724	HCEG_12007	F0U6Z1	F0UWE4	Uncharacterized protein.	ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family.	0.975