STRINGSTRING
HCEG_08957 HCEG_08957 HCEG_06589 HCEG_06589 HCEG_06509 HCEG_06509 HCEG_06482 HCEG_06482 HCEG_05295 HCEG_05295 HCEG_05223 HCEG_05223 HCEG_05882 HCEG_05882 HCEG_05881 HCEG_05881 HCEG_05081 HCEG_05081 LSM4 LSM4 HCEG_04816 HCEG_04816 HCEG_04807 HCEG_04807 HCEG_05598 HCEG_05598 HCEG_05581 HCEG_05581 HCEG_05510 HCEG_05510 LSM3 LSM3 HCEG_03674 HCEG_03674 HCEG_03629 HCEG_03629 HCEG_04392 HCEG_04392 HCEG_04279 HCEG_04279 HCEG_03450 HCEG_03450 HCEG_03265 HCEG_03265 HCEG_03960 HCEG_03960 HCEG_03908 HCEG_03908 HCEG_03878 HCEG_03878 HCEG_03863 HCEG_03863 HCEG_03776 HCEG_03776 LSM8 LSM8 HCEG_02551 HCEG_02551 HCEG_02334 HCEG_02334 HCEG_02225 HCEG_02225 HCEG_03016 HCEG_03016 HCEG_02208 HCEG_02208 HCEG_02041 HCEG_02041 HCEG_02848 HCEG_02848 HCEG_02833 HCEG_02833 HCEG_00390 HCEG_00390 HCEG_00324 HCEG_00324 HCEG_00890 HCEG_00890 HCEG_00018 HCEG_00018 HCEG_00821 HCEG_00821 HCEG_00785 HCEG_00785 HCEG_00662 HCEG_00662 HCEG_01380 HCEG_01380 HCEG_07382 HCEG_07382 HCEG_07484 HCEG_07484 HCEG_07508 HCEG_07508 HCEG_07645 HCEG_07645 HCEG_07769 HCEG_07769 HCEG_08551 HCEG_08551 HCEG_08554 HCEG_08554 HCEG_09292 HCEG_09292 HCEG_09345 HCEG_09345 HCEG_07072 HCEG_07072 HCEG_06874 HCEG_06874 HCEG_06011 HCEG_06011 HCEG_06751 HCEG_06751 HCEG_06696 HCEG_06696 HCEG_06597 HCEG_06597
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCEG_08957Pre-mRNA-splicing factor Rse1. (1209 aa)
HCEG_06589U5 small nuclear ribonucleoprotein component. (990 aa)
HCEG_06509WD40 repeat-containing protein. (348 aa)
HCEG_06482RNA binding domain-containing protein. (276 aa)
HCEG_05295Splicing factor 3B. (1227 aa)
HCEG_05223mRNA splicing protein PRP8. (2888 aa)
HCEG_05882Uncharacterized protein. (304 aa)
HCEG_05881Small nuclear ribonucleoprotein. (262 aa)
HCEG_05081GTP-binding protein. (263 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (124 aa)
HCEG_04816Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (142 aa)
HCEG_04807Sm domain-containing protein. (228 aa)
HCEG_05598Pre-mRNA branch site protein p14. (115 aa)
HCEG_05581Pre-mRNA-splicing factor. (941 aa)
HCEG_05510Multiple RNA-binding domain-containing protein. (801 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
HCEG_03674Small nuclear ribonucleoprotein Sm D2. (187 aa)
HCEG_03629U1 small nuclear ribonucleoprotein. (452 aa)
HCEG_04392RNA-binding protein. (1309 aa)
HCEG_04279Cell cycle control protein. (148 aa)
HCEG_03450Sm domain-containing protein. (169 aa)
HCEG_03265Pre-mRNA-splicing factor. (366 aa)
HCEG_03960Uncharacterized protein. (399 aa)
HCEG_03908Small nuclear ribonucleoprotein G. (78 aa)
HCEG_03878Pre-mRNA-splicing factor. (2968 aa)
HCEG_03863U4/U6 small nuclear ribonucleoprotein Prp4. (546 aa)
HCEG_03776Small nuclear ribonucleoprotein U. (253 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
HCEG_02551Nuclear mRNA splicing factor-associated protein. (414 aa)
HCEG_02334Splicing factor 3A. (236 aa)
HCEG_02225Pre-mRNA-processing factor 31. (616 aa)
HCEG_03016Pre-mRNA-splicing factor Ini1. (110 aa)
HCEG_02208Pre-mRNA-processing protein prp40. (827 aa)
HCEG_02041Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
HCEG_02848U4/U6 small nuclear ribonucleoprotein Prp3. (559 aa)
HCEG_02833C2H2 finger domain-containing protein. (216 aa)
HCEG_00390Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
HCEG_00324CID domain-containing protein. (836 aa)
HCEG_00890Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (113 aa)
HCEG_00018Small nuclear ribonucleoprotein LSM2. (148 aa)
HCEG_00821Pre-mRNA-processing factor 39. (595 aa)
HCEG_00785U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (242 aa)
HCEG_00662U4/U6.U5 tri-snRNP-associated protein snu66. (683 aa)
HCEG_01380SMN domain-containing protein. (175 aa)
HCEG_07382GYF domain-containing protein. (387 aa)
HCEG_07484Splicing factor 3B. (577 aa)
HCEG_07508Splicing factor 3B. (387 aa)
HCEG_07645U1 snRNP-associated protein Usp107. (759 aa)
HCEG_07769AAR2 domain-containing protein. (520 aa)
HCEG_08551FF domain-containing protein. (571 aa)
HCEG_08554U1 snRNP-associated protein Usp106. (294 aa)
HCEG_09292RNA binding domain-containing protein. (190 aa)
HCEG_09345LSM domain-containing protein. (95 aa)
HCEG_07072Splicing factor Sap114. (581 aa)
HCEG_06874Sm domain-containing protein. (90 aa)
HCEG_06011WD40 repeat-containing protein. (1622 aa)
HCEG_06751Topisomerase II associated protein. (832 aa)
HCEG_06696Small nuclear ribonucleoprotein U2. (266 aa)
HCEG_06597Uncharacterized protein. (324 aa)
Your Current Organism:
Histoplasma capsulatum H88
NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88
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