18 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_04657	CBF/NF-Y family transcription factor. (141 aa)
	HCEG_04695	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (720 aa)
	HCEG_05680	Transcription factor TFIID. (1117 aa)
	HCEG_05962	DNA polymerase epsilon subunit Dpb3. (250 aa)
	HCEG_05364	Uncharacterized protein. (769 aa)
	HCEG_06841	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (131 aa)
	HCEG_00162	Transcription initiation protein. (352 aa)
	HCEG_00270	Transcription initiation factor TFIID-2. (262 aa)
	HCEG_06280	Transcription initiation factor TFIID complex 60 kDa subunit. (629 aa)
	HCEG_07597	Transcription factor tfiiib component. (600 aa)
	HCEG_04412	Bromodomain associated protein. (363 aa)
	HCEG_02914	Transcription factor tfiiib complex subunit brf1. (837 aa)
	HCEG_07795	Uncharacterized protein. (470 aa)
	HCEG_08526	BTB domain-containing protein. (866 aa)
	HCEG_08934	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (298 aa)
	HCEG_01206	RNA polymerase II transcription factor SIII subunit A. (383 aa)
	HCEG_00304	Transcription factor tfiiic complex subunit tfc6. (770 aa)
	HCEG_04440	RNA polymerase II transcription factor B subunit 5. (120 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00162	HCEG_00270	F0U7X8	F0U8K3	Transcription initiation protein.	Transcription initiation factor TFIID-2.	0.999
HCEG_00162	HCEG_00304	F0U7X8	F0U8N7	Transcription initiation protein.	Transcription factor tfiiic complex subunit tfc6.	0.525
HCEG_00162	HCEG_02914	F0U7X8	F0UAJ0	Transcription initiation protein.	Transcription factor tfiiib complex subunit brf1.	0.452
HCEG_00162	HCEG_04412	F0U7X8	F0UGV8	Transcription initiation protein.	Bromodomain associated protein.	0.923
HCEG_00162	HCEG_04440	F0U7X8	F0UH38	Transcription initiation protein.	RNA polymerase II transcription factor B subunit 5.	0.881
HCEG_00162	HCEG_04657	F0U7X8	F0UHN1	Transcription initiation protein.	CBF/NF-Y family transcription factor.	0.568
HCEG_00162	HCEG_04695	F0U7X8	F0UHX1	Transcription initiation protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.996
HCEG_00162	HCEG_05680	F0U7X8	F0UIW8	Transcription initiation protein.	Transcription factor TFIID.	0.993
HCEG_00162	HCEG_05962	F0U7X8	F0UKG6	Transcription initiation protein.	DNA polymerase epsilon subunit Dpb3.	0.629
HCEG_00162	HCEG_06280	F0U7X8	F0UQ15	Transcription initiation protein.	Transcription initiation factor TFIID complex 60 kDa subunit.	0.968
HCEG_00162	HCEG_06841	F0U7X8	F0UNM1	Transcription initiation protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.972
HCEG_00162	HCEG_07597	F0U7X8	F0UR55	Transcription initiation protein.	Transcription factor tfiiib component.	0.414
HCEG_00162	HCEG_08526	F0U7X8	F0UTT4	Transcription initiation protein.	BTB domain-containing protein.	0.976
HCEG_00162	HCEG_08934	F0U7X8	F0UUZ2	Transcription initiation protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.994
HCEG_00270	HCEG_00162	F0U8K3	F0U7X8	Transcription initiation factor TFIID-2.	Transcription initiation protein.	0.999
HCEG_00270	HCEG_00304	F0U8K3	F0U8N7	Transcription initiation factor TFIID-2.	Transcription factor tfiiic complex subunit tfc6.	0.696
HCEG_00270	HCEG_02914	F0U8K3	F0UAJ0	Transcription initiation factor TFIID-2.	Transcription factor tfiiib complex subunit brf1.	0.999
HCEG_00270	HCEG_04412	F0U8K3	F0UGV8	Transcription initiation factor TFIID-2.	Bromodomain associated protein.	0.997
HCEG_00270	HCEG_04440	F0U8K3	F0UH38	Transcription initiation factor TFIID-2.	RNA polymerase II transcription factor B subunit 5.	0.845
HCEG_00270	HCEG_04657	F0U8K3	F0UHN1	Transcription initiation factor TFIID-2.	CBF/NF-Y family transcription factor.	0.984