13 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_00162	Transcription initiation protein. (352 aa)
	HCEG_00376	TBP associated factor. (1756 aa)
	HCEG_02914	Transcription factor tfiiib complex subunit brf1. (837 aa)
	HCEG_03592	Protein kinase domain-containing protein. (1717 aa)
	HCEG_04695	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (720 aa)
	HCEG_05680	Transcription factor TFIID. (1117 aa)
	HCEG_06390	Transcription factor SPT8. (626 aa)
	HCEG_06841	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (131 aa)
	HCEG_06842	Uncharacterized protein. (396 aa)
	HCEG_07132	Transcription initiation factor TFIID subunit 12. (668 aa)
	HCEG_07597	Transcription factor tfiiib component. (600 aa)
	HCEG_07795	Uncharacterized protein. (470 aa)
	HCEG_07979	Uncharacterized protein. (944 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00162	HCEG_00376	F0U7X8	F0U964	Transcription initiation protein.	TBP associated factor.	0.593
HCEG_00162	HCEG_02914	F0U7X8	F0UAJ0	Transcription initiation protein.	Transcription factor tfiiib complex subunit brf1.	0.452
HCEG_00162	HCEG_04695	F0U7X8	F0UHX1	Transcription initiation protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.996
HCEG_00162	HCEG_05680	F0U7X8	F0UIW8	Transcription initiation protein.	Transcription factor TFIID.	0.993
HCEG_00162	HCEG_06841	F0U7X8	F0UNM1	Transcription initiation protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.972
HCEG_00162	HCEG_06842	F0U7X8	F0UNM2	Transcription initiation protein.	Uncharacterized protein.	0.967
HCEG_00162	HCEG_07132	F0U7X8	F0UQ74	Transcription initiation protein.	Transcription initiation factor TFIID subunit 12.	0.982
HCEG_00162	HCEG_07597	F0U7X8	F0UR55	Transcription initiation protein.	Transcription factor tfiiib component.	0.414
HCEG_00376	HCEG_00162	F0U964	F0U7X8	TBP associated factor.	Transcription initiation protein.	0.593
HCEG_00376	HCEG_05680	F0U964	F0UIW8	TBP associated factor.	Transcription factor TFIID.	0.505
HCEG_00376	HCEG_07132	F0U964	F0UQ74	TBP associated factor.	Transcription initiation factor TFIID subunit 12.	0.572
HCEG_00376	HCEG_07597	F0U964	F0UR55	TBP associated factor.	Transcription factor tfiiib component.	0.583
HCEG_02914	HCEG_00162	F0UAJ0	F0U7X8	Transcription factor tfiiib complex subunit brf1.	Transcription initiation protein.	0.452
HCEG_02914	HCEG_07597	F0UAJ0	F0UR55	Transcription factor tfiiib complex subunit brf1.	Transcription factor tfiiib component.	0.999
HCEG_02914	HCEG_07795	F0UAJ0	F0URQ3	Transcription factor tfiiib complex subunit brf1.	Uncharacterized protein.	0.438
HCEG_02914	HCEG_07979	F0UAJ0	F0US87	Transcription factor tfiiib complex subunit brf1.	Uncharacterized protein.	0.438
HCEG_04695	HCEG_00162	F0UHX1	F0U7X8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation protein.	0.996
HCEG_04695	HCEG_05680	F0UHX1	F0UIW8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription factor TFIID.	0.988
HCEG_04695	HCEG_06841	F0UHX1	F0UNM1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.963
HCEG_04695	HCEG_06842	F0UHX1	F0UNM2	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.957