4 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_04405	Non-specific serine/threonine protein kinase. (837 aa)
	HCEG_00760	Uncharacterized protein. (114 aa)
	HCEG_03648	Uncharacterized protein. (674 aa)
	HCEG_03647	Nuclear protein SNF4. (379 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00760	HCEG_03647	F0U607	F0UH85	Uncharacterized protein.	Nuclear protein SNF4.	0.934
HCEG_00760	HCEG_03648	F0U607	F0UH86	Uncharacterized protein.	Uncharacterized protein.	0.934
HCEG_03647	HCEG_00760	F0UH85	F0U607	Nuclear protein SNF4.	Uncharacterized protein.	0.934
HCEG_03647	HCEG_04405	F0UH85	F0UGV1	Nuclear protein SNF4.	Non-specific serine/threonine protein kinase.	0.974
HCEG_03648	HCEG_00760	F0UH86	F0U607	Uncharacterized protein.	Uncharacterized protein.	0.934
HCEG_03648	HCEG_04405	F0UH86	F0UGV1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.974
HCEG_04405	HCEG_03647	F0UGV1	F0UH85	Non-specific serine/threonine protein kinase.	Nuclear protein SNF4.	0.974
HCEG_04405	HCEG_03648	F0UGV1	F0UH86	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.974