(21 nodes) UBA-like superfamily network (Histoplasma capsulatum H88)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_05474	mRNA export factor mex67. (1621 aa)
	HCEG_08956	Deubiquitination-protection protein dph1. (473 aa)
	HCEG_08441	Smr domain-containing protein. (557 aa)
	HCEG_08026	CUE domain-containing protein. (428 aa)
	HCEG_07954	Ubiquitin carboxyl-terminal hydrolase. (787 aa)
	HCEG_06349	UBA/TS-N domain-containing protein. (885 aa)
	HCEG_06494	Ubiquitin interaction domain-containing protein. (943 aa)
	HCEG_06567	Vacuolar sorting-associated protein. (790 aa)
	HCEG_06275	UBX domain-containing protein. (387 aa)
	HCEG_01449	DNA-binding protein. (691 aa)
	HCEG_00856	DNA damage-inducible protein. (445 aa)
	HCEG_00179	Rnapii degradation factor def1. (884 aa)
	HCEG_03104	DEAH box polypeptide 36. (1344 aa)
	HCEG_03180	UBX domain-containing protein Ubx2. (581 aa)
	HCEG_01897	AMFR protein. (197 aa)
	HCEG_01915	GTPase-activating protein. (643 aa)
	HCEG_04022	Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (246 aa)
	HCEG_04069	Pre-mRNA-splicing factor Cwc24. (826 aa)
	HCEG_07398	EF hand domain-containing protein. (1279 aa)
	HCEG_04186	CUE domain-containing protein. (719 aa)
	HCEG_03448	UBX domain-containing protein. (524 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00856	HCEG_04069	F0U6R5	F0UEZ7	DNA damage-inducible protein.	Pre-mRNA-splicing factor Cwc24.	0.929
HCEG_00856	HCEG_08956	F0U6R5	F0UV14	DNA damage-inducible protein.	Deubiquitination-protection protein dph1.	0.690
HCEG_01449	HCEG_03180	F0U596	F0UC19	DNA-binding protein.	UBX domain-containing protein Ubx2.	0.924
HCEG_01449	HCEG_03448	F0U596	F0UG27	DNA-binding protein.	UBX domain-containing protein.	0.922
HCEG_01449	HCEG_04069	F0U596	F0UEZ7	DNA-binding protein.	Pre-mRNA-splicing factor Cwc24.	0.920
HCEG_01449	HCEG_06275	F0U596	F0UQ10	DNA-binding protein.	UBX domain-containing protein.	0.921
HCEG_01449	HCEG_08956	F0U596	F0UV14	DNA-binding protein.	Deubiquitination-protection protein dph1.	0.711
HCEG_03104	HCEG_07398	F0UBI8	F0UQK6	DEAH box polypeptide 36.	EF hand domain-containing protein.	0.557
HCEG_03104	HCEG_08956	F0UBI8	F0UV14	DEAH box polypeptide 36.	Deubiquitination-protection protein dph1.	0.459
HCEG_03180	HCEG_01449	F0UC19	F0U596	UBX domain-containing protein Ubx2.	DNA-binding protein.	0.924
HCEG_03180	HCEG_03448	F0UC19	F0UG27	UBX domain-containing protein Ubx2.	UBX domain-containing protein.	0.909
HCEG_03180	HCEG_04022	F0UC19	F0UES7	UBX domain-containing protein Ubx2.	Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.469
HCEG_03180	HCEG_04069	F0UC19	F0UEZ7	UBX domain-containing protein Ubx2.	Pre-mRNA-splicing factor Cwc24.	0.740
HCEG_03180	HCEG_06275	F0UC19	F0UQ10	UBX domain-containing protein Ubx2.	UBX domain-containing protein.	0.950
HCEG_03180	HCEG_08956	F0UC19	F0UV14	UBX domain-containing protein Ubx2.	Deubiquitination-protection protein dph1.	0.764
HCEG_03448	HCEG_01449	F0UG27	F0U596	UBX domain-containing protein.	DNA-binding protein.	0.922
HCEG_03448	HCEG_03180	F0UG27	F0UC19	UBX domain-containing protein.	UBX domain-containing protein Ubx2.	0.909
HCEG_03448	HCEG_04069	F0UG27	F0UEZ7	UBX domain-containing protein.	Pre-mRNA-splicing factor Cwc24.	0.416
HCEG_03448	HCEG_06275	F0UG27	F0UQ10	UBX domain-containing protein.	UBX domain-containing protein.	0.960
HCEG_03448	HCEG_08956	F0UG27	F0UV14	UBX domain-containing protein.	Deubiquitination-protection protein dph1.	0.501