60 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_08793	OB-fold nucleic acid binding domain-containing protein. (278 aa)
	HCEG_00517	Aspartyl-tRNA synthetase. (637 aa)
	HCEG_00626	Mitotic control protein dis3; Belongs to the RNR ribonuclease family. (1037 aa)
	HCEG_01602	Uncharacterized protein. (178 aa)
	HCEG_01672	Asparaginyl-tRNA synthetase. (591 aa)
	HCEG_01716	Exosome complex exonuclease RRP40. (279 aa)
	HCEG_01752	Aspartyl-tRNA synthetase. (994 aa)
	HCEG_00118	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (439 aa)
	HCEG_01820	Uncharacterized protein. (221 aa)
	HCEG_00222	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (422 aa)
	HCEG_00253	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family. (464 aa)
	HCEG_01075	Ribosomal RNA processing protein RRP5. (1817 aa)
	HCEG_01096	mRNA capping enzyme alpha subunit. (337 aa)
	HCEG_01097	DNA ligase. (945 aa)
	HCEG_00290	Cell division cycle protein. (803 aa)
	HCEG_01972	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	HCEG_02033	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (392 aa)
	HCEG_02110	Exosome complex exonuclease RRP4. (372 aa)
	HCEG_02964	DNA ligase. (844 aa)
	HCEG_03100	Telomere-binding alpha subunit central domain-containing protein. (655 aa)
	HCEG_02302	60S ribosomal protein. (402 aa)
	HCEG_02368	Uncharacterized protein. (371 aa)
	MCM7	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (818 aa)
	HCEG_03224	Predicted protein. (69 aa)
	HCEG_02583	Cell wall biogenesis protein phosphatase Ssd1. (1382 aa)
	HCEG_03761	DNA ligase. (1023 aa)
	HCEG_03771	S1-like domain-containing protein. (134 aa)
	HCEG_03831	DNA-directed RNA polymerase III. (195 aa)
	HCEG_03930	RNA polymerase II subunit 7. (169 aa)
	HCEG_04021	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (455 aa)
	HCEG_04108	SsDNA binding protein. (140 aa)
	HCEG_03635	Exosome complex subunit Csl4. (289 aa)
	HCEG_03672	SsDNA binding protein Ssb3. (117 aa)
	HCEG_04696	Uncharacterized protein. (537 aa)
	HCEG_05525	Lysyl-tRNA synthetase. (567 aa)
	HCEG_04744	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	HCEG_05620	DNA helicase; Belongs to the MCM family. (1806 aa)
	HCEG_05087	Mitochondrial exoribonuclease Cyt-4. (1007 aa)
	HCEG_05366	Aspartyl-tRNA synthetase. (971 aa)
	HCEG_06424	Woronin body major protein. (525 aa)
	HCEG_06625	tRNA(M5U54)methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (562 aa)
	HCEG_06688	DNA-directed RNA polymerase I. (114 aa)
	HCEG_06721	DNA helicase; Belongs to the MCM family. (965 aa)
	HCEG_06748	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (175 aa)
	HCEG_06757	ATP-dependent RNA helicase DHX8. (1226 aa)
	HCEG_06780	Asparaginyl-tRNA synthetase. (581 aa)
	HCEG_08882	Eukaryotic translation initiation factor 5A. (161 aa)
	HCEG_06809	Acyl-RNA-complex subunit. (458 aa)
	HCEG_06921	Single-stranded DNA binding protein p30 subunit. (276 aa)
	HCEG_08870	DNA helicase; Belongs to the MCM family. (877 aa)
	HCEG_06125	ATP-dependent DNA ligase. (1087 aa)
	HCEG_06955	DNA helicase; Belongs to the MCM family. (882 aa)
	HCEG_06134	DNA helicase; Belongs to the MCM family. (718 aa)
	HCEG_06996	Eukaryotic translation initiation factor 2 alpha subunit. (309 aa)
	HCEG_06247	3-dehydroshikimate dehydratase. (1294 aa)
	HCEG_07953	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (602 aa)
	HCEG_08043	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	HCEG_08085	60S ribosomal protein. (348 aa)
	HCEG_08324	Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (150 aa)
	HCEG_08521	Lysine--tRNA ligase. (609 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00118	HCEG_00222	F0U7H9	F0U8A2	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.999
HCEG_00118	HCEG_00253	F0U7H9	F0U8D3	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family.	0.999
HCEG_00118	HCEG_01972	F0U7H9	F0U9T5	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.420
HCEG_00118	HCEG_02033	F0U7H9	F0UA46	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.	0.999
HCEG_00118	HCEG_04021	F0U7H9	F0UES6	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
HCEG_00118	HCEG_04744	F0U7H9	F0UI73	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
HCEG_00118	HCEG_06996	F0U7H9	F0UPI2	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	Eukaryotic translation initiation factor 2 alpha subunit.	0.537
HCEG_00118	HCEG_08085	F0U7H9	F0USJ3	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	60S ribosomal protein.	0.511
HCEG_00222	HCEG_00118	F0U8A2	F0U7H9	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
HCEG_00222	HCEG_00253	F0U8A2	F0U8D3	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family.	0.999
HCEG_00222	HCEG_01972	F0U8A2	F0U9T5	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.432
HCEG_00222	HCEG_02033	F0U8A2	F0UA46	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.	0.999
HCEG_00222	HCEG_04021	F0U8A2	F0UES6	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
HCEG_00222	HCEG_04744	F0U8A2	F0UI73	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
HCEG_00222	HCEG_06424	F0U8A2	F0ULV9	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Woronin body major protein.	0.476
HCEG_00222	HCEG_06996	F0U8A2	F0UPI2	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Eukaryotic translation initiation factor 2 alpha subunit.	0.430
HCEG_00222	HCEG_08085	F0U8A2	F0USJ3	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	60S ribosomal protein.	0.409
HCEG_00222	HCEG_08882	F0U8A2	F0UUU0	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Eukaryotic translation initiation factor 5A.	0.476
HCEG_00253	HCEG_00118	F0U8D3	F0U7H9	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
HCEG_00253	HCEG_00222	F0U8D3	F0U8A2	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.999