46 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_05444	ATP synthase subunit gamma. (298 aa)
	HCEG_06201	DnaJ domain-containing protein. (742 aa)
	HCEG_07071	GDP/GTP exchange factor Sec2p. (700 aa)
	HCEG_06291	Spindle pole body associated protein SnaD. (804 aa)
	HCEG_07380	Uncharacterized protein. (546 aa)
	HCEG_07394	Uncharacterized protein. (104 aa)
	HCEG_07397	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	HCEG_07436	Mitochondrial ATP synthase subunit epsilon domain-containing protein. (59 aa)
	HCEG_08174	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (97 aa)
	HCEG_08239	Predicted protein. (261 aa)
	HCEG_08313	Predicted protein. (1052 aa)
	HCEG_08377	Secretion pathway protein Sls2/Rcy1. (824 aa)
	HCEG_08580	Uncharacterized protein. (528 aa)
	HCEG_08611	Uncharacterized protein. (253 aa)
	HCEG_08655	Transcriptional regulatory protein. (336 aa)
	HCEG_08849	P150 dynactin NUDM. (1362 aa)
	HCEG_08919	Spindle pole body component. (909 aa)
	HCEG_09007	Mis6 domain-containing protein. (724 aa)
	HCEG_09179	DUF1713 domain-containing protein. (389 aa)
	HCEG_09186	Predicted protein. (762 aa)
	HCEG_09259	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (781 aa)
	HCEG_12007	ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family. (74 aa)
	HCEG_12014	ATP synthase subunit a. (256 aa)
	HCEG_01414	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (460 aa)
	HCEG_00598	Myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1246 aa)
	HCEG_01684	Calmodulin-binding coil-coil protein. (1234 aa)
	HCEG_00034	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	HCEG_00476	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (686 aa)
	HCEG_02948	Microtubule associated protein EB1. (250 aa)
	HCEG_02550	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	HCEG_02620	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	HCEG_02621	Uncharacterized protein. (601 aa)
	HCEG_03780	Sec7 domain-containing protein. (1623 aa)
	HCEG_03933	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (466 aa)
	HCEG_03950	ATP synthase subunit 4. (244 aa)
	HCEG_03952	Uncharacterized protein. (415 aa)
	HCEG_04108	SsDNA binding protein. (140 aa)
	HCEG_03302	ATP synthase subunit G. (179 aa)
	HCEG_03324	ADP-ribose 1''-phosphate phosphatase. (260 aa)
	HCEG_03333	Uncharacterized protein. (986 aa)
	HCEG_03454	6-chlorohydroxyquinol-1,2-dioxygenase. (352 aa)
	HCEG_05591	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (1076 aa)
	HCEG_05751	ATP synthase subunit 5. (229 aa)
	HCEG_05770	Uncharacterized protein. (357 aa)
	HCEG_05333	Deacetylase sirtuin-type domain-containing protein. (346 aa)
	HCEG_05421	ATP synthase subunit delta. (216 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00034	HCEG_01684	F0U6N3	F0U6J4	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Calmodulin-binding coil-coil protein.	0.434
HCEG_00034	HCEG_02550	F0U6N3	F0UCQ9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.998
HCEG_00034	HCEG_02620	F0U6N3	F0UCX9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.698
HCEG_00034	HCEG_02621	F0U6N3	F0UCY0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.634
HCEG_00034	HCEG_02948	F0U6N3	F0UAM4	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Microtubule associated protein EB1.	0.922
HCEG_00034	HCEG_07397	F0U6N3	F0UQK5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.919
HCEG_00034	HCEG_08239	F0U6N3	F0USZ7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Predicted protein.	0.786
HCEG_00034	HCEG_08919	F0U6N3	F0UUX7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Spindle pole body component.	0.877
HCEG_00034	HCEG_09007	F0U6N3	F0UV65	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Mis6 domain-containing protein.	0.981
HCEG_00034	HCEG_09179	F0U6N3	F0UVN7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	DUF1713 domain-containing protein.	0.585
HCEG_00476	HCEG_03302	F0U9L7	F0UF75	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	ATP synthase subunit G.	0.513
HCEG_00476	HCEG_03933	F0U9L7	F0UEI8	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.726
HCEG_00476	HCEG_05444	F0U9L7	F0ULF9	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	ATP synthase subunit gamma.	0.559
HCEG_00476	HCEG_05751	F0U9L7	F0UJ91	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	ATP synthase subunit 5.	0.424
HCEG_00476	HCEG_06201	F0U9L7	F0UPN3	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	DnaJ domain-containing protein.	0.755
HCEG_00476	HCEG_08174	F0U9L7	F0UST2	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.982
HCEG_00598	HCEG_07071	F0U535	F0UPW1	Myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	GDP/GTP exchange factor Sec2p.	0.515
HCEG_01414	HCEG_05333	F0U509	F0UL14	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Deacetylase sirtuin-type domain-containing protein.	0.958
HCEG_01414	HCEG_05591	F0U509	F0UIC4	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.966
HCEG_01414	HCEG_08655	F0U509	F0UU63	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Transcriptional regulatory protein.	0.692