12 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_06493	SET domain-containing protein. (496 aa)
	HCEG_07045	Anaphase-promoting complex subunit Apc5. (714 aa)
	HCEG_05736	DUF1674 domain-containing protein. (156 aa)
	HCEG_04228	Histone H2B; Belongs to the histone H2B family. (138 aa)
	HCEG_02730	Ubiquitin-conjugating enzyme E2. (154 aa)
	HCEG_02582	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (543 aa)
	HCEG_02985	Ubiquitin-like domain-containing protein. (152 aa)
	HCEG_01838	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (383 aa)
	HCEG_00574	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (413 aa)
	HCEG_01354	BZIP domain-containing protein. (252 aa)
	HCEG_08937	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (185 aa)
	HCEG_09057	SET domain-containing protein. (392 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00574	HCEG_01354	F0U4V8	F0U4P5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	BZIP domain-containing protein.	0.506
HCEG_00574	HCEG_01838	F0U4V8	F0U7W4	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.705
HCEG_00574	HCEG_02985	F0U4V8	F0UAW3	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ubiquitin-like domain-containing protein.	0.506
HCEG_00574	HCEG_04228	F0U4V8	F0UFW4	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Histone H2B; Belongs to the histone H2B family.	0.445
HCEG_00574	HCEG_08937	F0U4V8	F0UUZ5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.420
HCEG_01354	HCEG_00574	F0U4P5	F0U4V8	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.506
HCEG_01354	HCEG_01838	F0U4P5	F0U7W4	BZIP domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.506
HCEG_01354	HCEG_02582	F0U4P5	F0UCU1	BZIP domain-containing protein.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.902
HCEG_01354	HCEG_02730	F0U4P5	F0UDD1	BZIP domain-containing protein.	Ubiquitin-conjugating enzyme E2.	0.852
HCEG_01354	HCEG_04228	F0U4P5	F0UFW4	BZIP domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.852
HCEG_01354	HCEG_06493	F0U4P5	F0UM81	BZIP domain-containing protein.	SET domain-containing protein.	0.742
HCEG_01354	HCEG_07045	F0U4P5	F0UPT5	BZIP domain-containing protein.	Anaphase-promoting complex subunit Apc5.	0.756
HCEG_01354	HCEG_08937	F0U4P5	F0UUZ5	BZIP domain-containing protein.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.772
HCEG_01354	HCEG_09057	F0U4P5	F0UVB5	BZIP domain-containing protein.	SET domain-containing protein.	0.742
HCEG_01838	HCEG_00574	F0U7W4	F0U4V8	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.705
HCEG_01838	HCEG_01354	F0U7W4	F0U4P5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	BZIP domain-containing protein.	0.506
HCEG_01838	HCEG_02985	F0U7W4	F0UAW3	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ubiquitin-like domain-containing protein.	0.506
HCEG_01838	HCEG_04228	F0U7W4	F0UFW4	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Histone H2B; Belongs to the histone H2B family.	0.445
HCEG_01838	HCEG_08937	F0U7W4	F0UUZ5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.420
HCEG_02582	HCEG_01354	F0UCU1	F0U4P5	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	BZIP domain-containing protein.	0.902