38 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_03641	Uncharacterized protein. (717 aa)
	HCEG_04796	CaaX farnesyltransferase alpha subunit. (355 aa)
	HCEG_07198	Uncharacterized protein. (338 aa)
	HCEG_06462	Serine/threonine protein phosphatase. (480 aa)
	HCEG_07329	Uncharacterized protein. (654 aa)
	HCEG_07335	Uncharacterized protein. (200 aa)
	HCEG_06584	C6 finger domain-containing protein. (780 aa)
	HCEG_06113	PH domain-containing protein. (983 aa)
	HCEG_06207	WD40 repeat-containing protein. (376 aa)
	HCEG_07075	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (549 aa)
	HCEG_07448	Protein kinase domain-containing protein. (724 aa)
	HCEG_07570	CaaX prenyl proteinase Rce1. (337 aa)
	HCEG_08195	Tyrosine-protein phosphatase domain-containing protein. (335 aa)
	HCEG_08454	Uncharacterized protein. (362 aa)
	HCEG_08548	Uncharacterized protein. (179 aa)
	HCEG_09123	Acyl-protein thioesterase. (239 aa)
	HCEG_09160	Prohibitin. (280 aa)
	HCEG_00513	Abhydrolase_2 domain-containing protein. (275 aa)
	HCEG_01354	BZIP domain-containing protein. (252 aa)
	HCEG_01459	Dual specificity phosphatase. (363 aa)
	HCEG_00673	CaaX farnesyltransferase beta subunit Ram1. (526 aa)
	HCEG_00678	RING-10 protein. (842 aa)
	HCEG_00124	Protein-tyrosine phosphatase. (497 aa)
	HCEG_01838	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (383 aa)
	HCEG_00251	Phospholipase/carboxylesterase. (120 aa)
	HCEG_00372	MAP kinase; Belongs to the protein kinase superfamily. (498 aa)
	HCEG_00458	Predicted protein. (132 aa)
	HCEG_00459	Tyrosine-protein phosphatase MSG5. (708 aa)
	HCEG_01298	Uncharacterized protein. (779 aa)
	HCEG_02116	MAP kinase. (542 aa)
	HCEG_02985	Ubiquitin-like domain-containing protein. (152 aa)
	HCEG_03004	Uncharacterized protein. (333 aa)
	HCEG_03195	Uncharacterized protein. (132 aa)
	HCEG_02671	Uncharacterized protein. (215 aa)
	HCEG_01922	Hemolysin-III family protein. (500 aa)
	HCEG_03808	Pps1 dual specificity phosphatase. (683 aa)
	HCEG_03358	Dual specificity mitogen-activated protein kinase dSOR1. (670 aa)
	HCEG_03539	ADP-ribosylation factor. (1909 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00124	HCEG_00372	F0U7I5	F0U908	Protein-tyrosine phosphatase.	MAP kinase; Belongs to the protein kinase superfamily.	0.498
HCEG_00124	HCEG_00458	F0U7I5	F0U9J9	Protein-tyrosine phosphatase.	Predicted protein.	0.599
HCEG_00124	HCEG_00459	F0U7I5	F0U9K0	Protein-tyrosine phosphatase.	Tyrosine-protein phosphatase MSG5.	0.599
HCEG_00124	HCEG_01298	F0U7I5	F0U9P7	Protein-tyrosine phosphatase.	Uncharacterized protein.	0.530
HCEG_00124	HCEG_01459	F0U7I5	F0U5A6	Protein-tyrosine phosphatase.	Dual specificity phosphatase.	0.585
HCEG_00124	HCEG_01838	F0U7I5	F0U7W4	Protein-tyrosine phosphatase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.831
HCEG_00124	HCEG_02116	F0U7I5	F0UAN5	Protein-tyrosine phosphatase.	MAP kinase.	0.498
HCEG_00124	HCEG_03358	F0U7I5	F0UFI3	Protein-tyrosine phosphatase.	Dual specificity mitogen-activated protein kinase dSOR1.	0.630
HCEG_00124	HCEG_03641	F0U7I5	F0UH79	Protein-tyrosine phosphatase.	Uncharacterized protein.	0.408
HCEG_00124	HCEG_03808	F0U7I5	F0UE63	Protein-tyrosine phosphatase.	Pps1 dual specificity phosphatase.	0.585
HCEG_00124	HCEG_06113	F0U7I5	F0UP39	Protein-tyrosine phosphatase.	PH domain-containing protein.	0.728
HCEG_00124	HCEG_06584	F0U7I5	F0UMQ2	Protein-tyrosine phosphatase.	C6 finger domain-containing protein.	0.435
HCEG_00124	HCEG_07329	F0U7I5	F0UMC2	Protein-tyrosine phosphatase.	Uncharacterized protein.	0.408
HCEG_00124	HCEG_07448	F0U7I5	F0UQQ6	Protein-tyrosine phosphatase.	Protein kinase domain-containing protein.	0.408
HCEG_00124	HCEG_08195	F0U7I5	F0USV3	Protein-tyrosine phosphatase.	Tyrosine-protein phosphatase domain-containing protein.	0.585
HCEG_00372	HCEG_00124	F0U908	F0U7I5	MAP kinase; Belongs to the protein kinase superfamily.	Protein-tyrosine phosphatase.	0.498
HCEG_00372	HCEG_01298	F0U908	F0U9P7	MAP kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.899
HCEG_00372	HCEG_01838	F0U908	F0U7W4	MAP kinase; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.839
HCEG_00372	HCEG_02116	F0U908	F0UAN5	MAP kinase; Belongs to the protein kinase superfamily.	MAP kinase.	0.684
HCEG_00372	HCEG_02671	F0U908	F0UD30	MAP kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.716