14 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_06490	Serine/threonine protein kinase PRR2. (683 aa)
	HCEG_03665	STE family protein kinase; Belongs to the protein kinase superfamily. (496 aa)
	HCEG_04071	Serine/threonine protein kinase hal4. (477 aa)
	HCEG_03789	Nitrogen permease reactivator protein. (823 aa)
	HCEG_02985	Ubiquitin-like domain-containing protein. (152 aa)
	HCEG_00422	Protein kinase domain-containing protein. (362 aa)
	HCEG_00311	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (415 aa)
	HCEG_00041	Serine/threonine protein kinase. (1106 aa)
	HCEG_01354	BZIP domain-containing protein. (252 aa)
	HCEG_08936	F-box domain-containing protein. (1572 aa)
	HCEG_08743	M-phase inducer phosphatase. (537 aa)
	HCEG_08291	Serine/threonine protein kinase cds1. (701 aa)
	HCEG_07847	Serine/threonine protein kinase. (581 aa)
	HCEG_07550	Serine/threonine protein kinase. (681 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00041	HCEG_01354	F0U6P0	F0U4P5	Serine/threonine protein kinase.	BZIP domain-containing protein.	0.502
HCEG_00041	HCEG_02985	F0U6P0	F0UAW3	Serine/threonine protein kinase.	Ubiquitin-like domain-containing protein.	0.502
HCEG_00041	HCEG_03789	F0U6P0	F0UE44	Serine/threonine protein kinase.	Nitrogen permease reactivator protein.	0.656
HCEG_00041	HCEG_04071	F0U6P0	F0UEZ9	Serine/threonine protein kinase.	Serine/threonine protein kinase hal4.	0.584
HCEG_00041	HCEG_06490	F0U6P0	F0UM78	Serine/threonine protein kinase.	Serine/threonine protein kinase PRR2.	0.638
HCEG_00041	HCEG_08743	F0U6P0	F0UUF1	Serine/threonine protein kinase.	M-phase inducer phosphatase.	0.826
HCEG_00041	HCEG_08936	F0U6P0	F0UUZ4	Serine/threonine protein kinase.	F-box domain-containing protein.	0.946
HCEG_00311	HCEG_08743	F0U8P4	F0UUF1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	M-phase inducer phosphatase.	0.710
HCEG_00422	HCEG_01354	F0U9B0	F0U4P5	Protein kinase domain-containing protein.	BZIP domain-containing protein.	0.502
HCEG_00422	HCEG_02985	F0U9B0	F0UAW3	Protein kinase domain-containing protein.	Ubiquitin-like domain-containing protein.	0.502
HCEG_00422	HCEG_03789	F0U9B0	F0UE44	Protein kinase domain-containing protein.	Nitrogen permease reactivator protein.	0.584
HCEG_00422	HCEG_04071	F0U9B0	F0UEZ9	Protein kinase domain-containing protein.	Serine/threonine protein kinase hal4.	0.584
HCEG_00422	HCEG_06490	F0U9B0	F0UM78	Protein kinase domain-containing protein.	Serine/threonine protein kinase PRR2.	0.584
HCEG_00422	HCEG_08743	F0U9B0	F0UUF1	Protein kinase domain-containing protein.	M-phase inducer phosphatase.	0.690
HCEG_00422	HCEG_08936	F0U9B0	F0UUZ4	Protein kinase domain-containing protein.	F-box domain-containing protein.	0.584
HCEG_01354	HCEG_00041	F0U4P5	F0U6P0	BZIP domain-containing protein.	Serine/threonine protein kinase.	0.502
HCEG_01354	HCEG_00422	F0U4P5	F0U9B0	BZIP domain-containing protein.	Protein kinase domain-containing protein.	0.502
HCEG_01354	HCEG_03665	F0U4P5	F0UHA3	BZIP domain-containing protein.	STE family protein kinase; Belongs to the protein kinase superfamily.	0.502
HCEG_01354	HCEG_07550	F0U4P5	F0UR08	BZIP domain-containing protein.	Serine/threonine protein kinase.	0.502
HCEG_01354	HCEG_07847	F0U4P5	F0URV5	BZIP domain-containing protein.	Serine/threonine protein kinase.	0.502