47 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_04023	Cyclin; Belongs to the cyclin family. (381 aa)
	HCEG_03956	Transcription initiation factor iif. (387 aa)
	HCEG_03930	RNA polymerase II subunit 7. (169 aa)
	HCEG_03929	Uncharacterized protein. (668 aa)
	HCEG_03909	TATA-binding protein associated factor Taf2. (1247 aa)
	HCEG_02351	RNA polymerase II transcription factor. (644 aa)
	HCEG_04695	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (720 aa)
	HCEG_05680	Transcription factor TFIID. (1117 aa)
	HCEG_05083	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1307 aa)
	HCEG_05386	Transcription initiation factor TFIID subunit 5. (715 aa)
	HCEG_06376	Uncharacterized protein. (269 aa)
	HCEG_07217	DUF4211 domain-containing protein. (524 aa)
	HCEG_06621	RNA polymerase II transcription factor B subunit 4. (412 aa)
	HCEG_06632	Predicted protein. (351 aa)
	HCEG_06688	DNA-directed RNA polymerase I. (114 aa)
	HCEG_06841	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (131 aa)
	HCEG_06842	Uncharacterized protein. (396 aa)
	HCEG_06219	DNA repair helicase RAD25. (1416 aa)
	HCEG_06278	Transcription factor TFIID. (394 aa)
	HCEG_06280	Transcription initiation factor TFIID complex 60 kDa subunit. (629 aa)
	HCEG_07132	Transcription initiation factor TFIID subunit 12. (668 aa)
	HCEG_07470	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (505 aa)
	HCEG_07910	Acyl_transf_3 domain-containing protein. (459 aa)
	HCEG_08034	TFIID subunit. (270 aa)
	HCEG_08042	Uncharacterized protein. (392 aa)
	HCEG_08526	BTB domain-containing protein. (866 aa)
	HCEG_08780	DNA-directed RNA polymerase II. (475 aa)
	HCEG_08934	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (298 aa)
	HCEG_02327	Metallothionein-I gene transcription activator. (75 aa)
	HCEG_03152	DNA-directed RNA polymerase II. (168 aa)
	HCEG_02058	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (485 aa)
	HCEG_02846	DNA repair helicase RAD3. (797 aa)
	HCEG_02822	RNA polymerase subunit. (236 aa)
	HCEG_01158	Transcription factor spTFIIE alpha subunit. (424 aa)
	HCEG_01151	DNA directed RNA polymerase II 15 kDa subunit. (126 aa)
	HCEG_00270	Transcription initiation factor TFIID-2. (262 aa)
	HCEG_00162	Transcription initiation protein. (352 aa)
	HCEG_00100	Polymerase II polypeptide D. (152 aa)
	HCEG_00050	Transcription initiation factor tfiid 55 kd subunit. (559 aa)
	HCEG_00807	CDK-activating kinase assembly factor MAT1. (379 aa)
	HCEG_09349	Serine/threonine protein kinase crk1; Belongs to the protein kinase superfamily. (413 aa)
	HCEG_05468	DNA-directed RNA polymerase I. (165 aa)
	HCEG_04440	RNA polymerase II transcription factor B subunit 5. (120 aa)
	HCEG_03498	Transcription factor TFIIA complex subunit Toa1. (425 aa)
	HCEG_03484	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1747 aa)
	HCEG_03479	Transcription initiation factor TFIID. (296 aa)
	HCEG_04208	DNA-directed RNA polymerase N. (115 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00050	HCEG_00100	F0U6P9	F0U756	Transcription initiation factor tfiid 55 kd subunit.	Polymerase II polypeptide D.	0.928
HCEG_00050	HCEG_00162	F0U6P9	F0U7X8	Transcription initiation factor tfiid 55 kd subunit.	Transcription initiation protein.	0.966
HCEG_00050	HCEG_00270	F0U6P9	F0U8K3	Transcription initiation factor tfiid 55 kd subunit.	Transcription initiation factor TFIID-2.	0.999
HCEG_00050	HCEG_00807	F0U6P9	F0U6A9	Transcription initiation factor tfiid 55 kd subunit.	CDK-activating kinase assembly factor MAT1.	0.927
HCEG_00050	HCEG_01151	F0U6P9	F0U8U2	Transcription initiation factor tfiid 55 kd subunit.	DNA directed RNA polymerase II 15 kDa subunit.	0.936
HCEG_00050	HCEG_01158	F0U6P9	F0U8U9	Transcription initiation factor tfiid 55 kd subunit.	Transcription factor spTFIIE alpha subunit.	0.952
HCEG_00050	HCEG_02058	F0U6P9	F0UA71	Transcription initiation factor tfiid 55 kd subunit.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.919
HCEG_00050	HCEG_02327	F0U6P9	F0UBV9	Transcription initiation factor tfiid 55 kd subunit.	Metallothionein-I gene transcription activator.	0.936
HCEG_00050	HCEG_02351	F0U6P9	F0UBY3	Transcription initiation factor tfiid 55 kd subunit.	RNA polymerase II transcription factor.	0.936
HCEG_00050	HCEG_02822	F0U6P9	F0U9Z4	Transcription initiation factor tfiid 55 kd subunit.	RNA polymerase subunit.	0.937
HCEG_00050	HCEG_02846	F0U6P9	F0UA18	Transcription initiation factor tfiid 55 kd subunit.	DNA repair helicase RAD3.	0.931
HCEG_00050	HCEG_03152	F0U6P9	F0UBT8	Transcription initiation factor tfiid 55 kd subunit.	DNA-directed RNA polymerase II.	0.917
HCEG_00050	HCEG_03479	F0U6P9	F0UG58	Transcription initiation factor tfiid 55 kd subunit.	Transcription initiation factor TFIID.	0.998
HCEG_00050	HCEG_03484	F0U6P9	F0UGB6	Transcription initiation factor tfiid 55 kd subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.920
HCEG_00050	HCEG_03498	F0U6P9	F0UGD0	Transcription initiation factor tfiid 55 kd subunit.	Transcription factor TFIIA complex subunit Toa1.	0.945
HCEG_00050	HCEG_03909	F0U6P9	F0UEG4	Transcription initiation factor tfiid 55 kd subunit.	TATA-binding protein associated factor Taf2.	0.999
HCEG_00050	HCEG_03929	F0U6P9	F0UEI4	Transcription initiation factor tfiid 55 kd subunit.	Uncharacterized protein.	0.779
HCEG_00050	HCEG_03930	F0U6P9	F0UEI5	Transcription initiation factor tfiid 55 kd subunit.	RNA polymerase II subunit 7.	0.917
HCEG_00050	HCEG_03956	F0U6P9	F0UEL1	Transcription initiation factor tfiid 55 kd subunit.	Transcription initiation factor iif.	0.962
HCEG_00050	HCEG_04023	F0U6P9	F0UES8	Transcription initiation factor tfiid 55 kd subunit.	Cyclin; Belongs to the cyclin family.	0.929