33 items (Histoplasma capsulatum H88) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCEG_01708	Uncharacterized protein. (111 aa)
	HCEG_02822	RNA polymerase subunit. (236 aa)
	HCEG_00270	Transcription initiation factor TFIID-2. (262 aa)
	HCEG_01803	HMG box protein. (857 aa)
	HCEG_04023	Cyclin; Belongs to the cyclin family. (381 aa)
	HCEG_04208	DNA-directed RNA polymerase N. (115 aa)
	HCEG_02351	RNA polymerase II transcription factor. (644 aa)
	HCEG_04228	Histone H2B; Belongs to the histone H2B family. (138 aa)
	HCEG_04440	RNA polymerase II transcription factor B subunit 5. (120 aa)
	HCEG_05468	DNA-directed RNA polymerase I. (165 aa)
	HCEG_05064	DNA-dependent RNA polymerase I subunit A43. (466 aa)
	HCEG_05282	DNA-directed RNA polymerase I and III. (380 aa)
	HCEG_00792	Chromodomain helicase. (1530 aa)
	HCEG_00807	CDK-activating kinase assembly factor MAT1. (379 aa)
	HCEG_06376	Uncharacterized protein. (269 aa)
	HCEG_02327	Metallothionein-I gene transcription activator. (75 aa)
	HCEG_02058	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (485 aa)
	HCEG_02847	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1697 aa)
	HCEG_02846	DNA repair helicase RAD3. (797 aa)
	HCEG_01690	Uncharacterized protein. (373 aa)
	HCEG_01709	Uncharacterized protein. (314 aa)
	HCEG_05364	Uncharacterized protein. (769 aa)
	HCEG_06621	RNA polymerase II transcription factor B subunit 4. (412 aa)
	HCEG_06688	DNA-directed RNA polymerase I. (114 aa)
	HCEG_06219	DNA repair helicase RAD25. (1416 aa)
	HCEG_07470	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (505 aa)
	HCEG_08053	Uncharacterized protein. (508 aa)
	HCEG_08171	TFIIS-type domain-containing protein. (81 aa)
	HCEG_08526	BTB domain-containing protein. (866 aa)
	HCEG_08758	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1242 aa)
	HCEG_08880	Ubiquitin. (138 aa)
	HCEG_08881	Uncharacterized protein. (667 aa)
	HCEG_09349	Serine/threonine protein kinase crk1; Belongs to the protein kinase superfamily. (413 aa)

Your Current Organism:

Histoplasma capsulatum H88

NCBI taxonomy Id: 544711
Other names: Ajellomyces capsulatus H88, H. capsulatum H88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCEG_00270	HCEG_00792	F0U8K3	F0U639	Transcription initiation factor TFIID-2.	Chromodomain helicase.	0.685
HCEG_00270	HCEG_00807	F0U8K3	F0U6A9	Transcription initiation factor TFIID-2.	CDK-activating kinase assembly factor MAT1.	0.987
HCEG_00270	HCEG_01690	F0U8K3	F0U6K0	Transcription initiation factor TFIID-2.	Uncharacterized protein.	0.567
HCEG_00270	HCEG_01708	F0U8K3	F0U6X5	Transcription initiation factor TFIID-2.	Uncharacterized protein.	0.674
HCEG_00270	HCEG_01709	F0U8K3	F0U6X6	Transcription initiation factor TFIID-2.	Uncharacterized protein.	0.674
HCEG_00270	HCEG_01803	F0U8K3	F0U7S9	Transcription initiation factor TFIID-2.	HMG box protein.	0.776
HCEG_00270	HCEG_02058	F0U8K3	F0UA71	Transcription initiation factor TFIID-2.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.983
HCEG_00270	HCEG_02327	F0U8K3	F0UBV9	Transcription initiation factor TFIID-2.	Metallothionein-I gene transcription activator.	0.989
HCEG_00270	HCEG_02351	F0U8K3	F0UBY3	Transcription initiation factor TFIID-2.	RNA polymerase II transcription factor.	0.989
HCEG_00270	HCEG_02822	F0U8K3	F0U9Z4	Transcription initiation factor TFIID-2.	RNA polymerase subunit.	0.991
HCEG_00270	HCEG_02846	F0U8K3	F0UA18	Transcription initiation factor TFIID-2.	DNA repair helicase RAD3.	0.985
HCEG_00270	HCEG_02847	F0U8K3	F0UA19	Transcription initiation factor TFIID-2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.925
HCEG_00270	HCEG_04023	F0U8K3	F0UES8	Transcription initiation factor TFIID-2.	Cyclin; Belongs to the cyclin family.	0.958
HCEG_00270	HCEG_04208	F0U8K3	F0UFP1	Transcription initiation factor TFIID-2.	DNA-directed RNA polymerase N.	0.989
HCEG_00270	HCEG_04228	F0U8K3	F0UFW4	Transcription initiation factor TFIID-2.	Histone H2B; Belongs to the histone H2B family.	0.831
HCEG_00270	HCEG_04440	F0U8K3	F0UH38	Transcription initiation factor TFIID-2.	RNA polymerase II transcription factor B subunit 5.	0.845
HCEG_00270	HCEG_05064	F0U8K3	F0UK09	Transcription initiation factor TFIID-2.	DNA-dependent RNA polymerase I subunit A43.	0.860
HCEG_00270	HCEG_05282	F0U8K3	F0UKW3	Transcription initiation factor TFIID-2.	DNA-directed RNA polymerase I and III.	0.960
HCEG_00270	HCEG_05364	F0U8K3	F0UL45	Transcription initiation factor TFIID-2.	Uncharacterized protein.	0.935
HCEG_00270	HCEG_05468	F0U8K3	F0UHP4	Transcription initiation factor TFIID-2.	DNA-directed RNA polymerase I.	0.989