STRINGSTRING
HCDG_01510 HCDG_01510 HCDG_03734 HCDG_03734 HCDG_04550 HCDG_04550 HCDG_04549 HCDG_04549 HCDG_04924 HCDG_04924 HCDG_04763 HCDG_04763 HCDG_04158 HCDG_04158 HCDG_01760 HCDG_01760 HCDG_01961 HCDG_01961 HCDG_02270 HCDG_02270 HCDG_01079 HCDG_01079 HCDG_01197 HCDG_01197 HCDG_03519 HCDG_03519 NTH1 NTH1 HCDG_01369 HCDG_01369 HCDG_01426 HCDG_01426 HCDG_00369 HCDG_00369 HCDG_06228 HCDG_06228 HCDG_05597 HCDG_05597 HCDG_05207 HCDG_05207 HCDG_05104 HCDG_05104 HCDG_04674 HCDG_04674 HCDG_02455 HCDG_02455 HCDG_02623 HCDG_02623 HCDG_02665 HCDG_02665 HCDG_02882 HCDG_02882 HCDG_03052 HCDG_03052 HCDG_03430 HCDG_03430 HCDG_03431 HCDG_03431 HCDG_09248 HCDG_09248 HCDG_09107 HCDG_09107 HCDG_09000 HCDG_09000 HCDG_08579 HCDG_08579 HCDG_08381 HCDG_08381 HCDG_08138 HCDG_08138 HCDG_08064 HCDG_08064 HCDG_07428 HCDG_07428 HCDG_07128 HCDG_07128 HCDG_06774 HCDG_06774 HCDG_06048 HCDG_06048 HCDG_06229 HCDG_06229
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCDG_01510Mating-type switching protein swi10. (361 aa)
HCDG_03734DNA repair helicase RAD3. (773 aa)
HCDG_04550RNA binding domain-containing protein. (162 aa)
HCDG_04549Uncharacterized protein. (111 aa)
HCDG_04924Uncharacterized protein. (181 aa)
HCDG_04763DNA repair helicase RAD25. (1379 aa)
HCDG_04158Nitrilase. (883 aa)
HCDG_01760UV-damage endonuclease. (704 aa)
HCDG_01961Checkpoint protein; Belongs to the HUS1 family. (364 aa)
HCDG_02270DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2111 aa)
HCDG_01079CDK-activating kinase assembly factor MAT1. (369 aa)
HCDG_01197Rad4 family protein. (907 aa)
HCDG_03519DNA polymerase. (1053 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (533 aa)
HCDG_01369DNA ligase. (899 aa)
HCDG_01426DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (129 aa)
HCDG_0036926S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
HCDG_06228DNA repair and recombination protein RAD26. (819 aa)
HCDG_05597DEAD/DEAH box helicase. (1198 aa)
HCDG_05207DNA repair protein RAD14. (334 aa)
HCDG_05104General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (505 aa)
HCDG_04674ATP-dependent DNA ligase domain-containing protein. (1086 aa)
HCDG_02455WD40 domain-containing protein. (487 aa)
HCDG_02623Proteasome regulatory particle subunit Rpt4. (371 aa)
HCDG_02665RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (485 aa)
HCDG_02882DNA excision repair protein. (979 aa)
HCDG_030528-oxoguanine DNA glycosylase. (422 aa)
HCDG_03430DNA repair protein RAD7. (638 aa)
HCDG_03431DNA repair protein RAD16. (848 aa)
HCDG_09248Pre-mRNA-splicing factor cwc24. (826 aa)
HCDG_09107DNA excision repair protein Rad2. (1159 aa)
HCDG_09000DNA repair protein RAD1. (866 aa)
HCDG_08579Rnapii degradation factor def1. (884 aa)
HCDG_08381Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (541 aa)
HCDG_08138RNA polymerase II transcription factor B subunit 5. (104 aa)
HCDG_08064Plus3 domain-containing protein. (638 aa)
HCDG_07428Single-stranded DNA binding protein p30 subunit. (265 aa)
HCDG_07128RNA polymerase II transcription factor B subunit 4. (412 aa)
HCDG_06774Nuclear pore complex subunit Nup192; Belongs to the cullin family. (2454 aa)
HCDG_06048RNA polymerase II transcription factor. (644 aa)
HCDG_06229DNA repair and recombination protein RAD26. (102 aa)
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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