STRINGSTRING
HCDG_08064 HCDG_08064 HCDG_00784 HCDG_00784 HCDG_01720 HCDG_01720 HCDG_02480 HCDG_02480 HCDG_03043 HCDG_03043 HCDG_03044 HCDG_03044 HCDG_09444 HCDG_09444 HCDG_08570 HCDG_08570 HCDG_08764 HCDG_08764 HCDG_08398 HCDG_08398 HCDG_08353 HCDG_08353 HCDG_08312 HCDG_08312 HCDG_08201 HCDG_08201 HCDG_05390 HCDG_05390 HCDG_05436 HCDG_05436 HCDG_05442 HCDG_05442 HCDG_06451 HCDG_06451 HCDG_06580 HCDG_06580 HCDG_07194 HCDG_07194
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCDG_08064Plus3 domain-containing protein. (638 aa)
HCDG_00784Transcription initiation protein spt5. (806 aa)
HCDG_01720Transcriptional elongation regulator Elc1/Elongin C; Belongs to the SKP1 family. (103 aa)
HCDG_02480Cell division control protein. (534 aa)
HCDG_03043FACT complex subunit pob3. (152 aa)
HCDG_03044FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (332 aa)
HCDG_09444RNA polymerase II transcription factor SIII subunit A. (383 aa)
HCDG_08570Uncharacterized protein. (687 aa)
HCDG_08764C-type cyclin. (395 aa)
HCDG_08398FACT complex subunit spt16. (1023 aa)
HCDG_08353WD40 domain-containing protein. (326 aa)
HCDG_08312Uncharacterized protein. (279 aa)
HCDG_08201Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (121 aa)
HCDG_05390Tetratricopeptide repeat domain-containing protein. (1244 aa)
HCDG_05436Serine/threonine protein kinase bur-1. (554 aa)
HCDG_05442Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (164 aa)
HCDG_06451Uncharacterized protein. (628 aa)
HCDG_06580CID domain-containing protein. (246 aa)
HCDG_07194Paxneb protein. (169 aa)
Your Current Organism:
Histoplasma capsulatum H143
NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143
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