18 items (Histoplasma capsulatum H143) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCDG_00325	DNA polymerase delta small subunit. (565 aa)
	HCDG_01727	DNA polymerase delta subunit 4. (214 aa)
	HCDG_02270	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2111 aa)
	HCDG_06236	DNA polymerase. (1458 aa)
	HCDG_06510	Uncharacterized protein. (384 aa)
	HCDG_07529	DNA polymerase. (1503 aa)
	HCDG_07321	Mitotic spindle checkpoint protein. (357 aa)
	HCDG_07941	Uncharacterized protein. (258 aa)
	HCDG_08024	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (567 aa)
	HCDG_06778	DNA polymerase gamma. (1084 aa)
	HCDG_05757	Uncharacterized protein. (320 aa)
	HCDG_06743	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (633 aa)
	HCDG_03519	DNA polymerase. (1053 aa)
	HCDG_03533	DUF1237 domain-containing protein. (877 aa)
	HCDG_03318	DNA polymerase epsilon subunit B. (644 aa)
	HCDG_03183	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (504 aa)
	HCDG_03182	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (696 aa)
	HCDG_02792	Uncharacterized protein. (309 aa)

Your Current Organism:

Histoplasma capsulatum H143

NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCDG_00325	HCDG_01727	C6H504	C6H5M6	DNA polymerase delta small subunit.	DNA polymerase delta subunit 4.	0.902
HCDG_00325	HCDG_02270	C6H504	C6H769	DNA polymerase delta small subunit.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.974
HCDG_00325	HCDG_02792	C6H504	C6H9B1	DNA polymerase delta small subunit.	Uncharacterized protein.	0.844
HCDG_00325	HCDG_03183	C6H504	C6HAF2	DNA polymerase delta small subunit.	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	0.965
HCDG_00325	HCDG_03318	C6H504	C6HAT7	DNA polymerase delta small subunit.	DNA polymerase epsilon subunit B.	0.920
HCDG_00325	HCDG_03519	C6H504	C6HBX0	DNA polymerase delta small subunit.	DNA polymerase.	0.999
HCDG_00325	HCDG_03533	C6H504	C6HBY4	DNA polymerase delta small subunit.	DUF1237 domain-containing protein.	0.883
HCDG_00325	HCDG_05757	C6H504	C6HHS6	DNA polymerase delta small subunit.	Uncharacterized protein.	0.953
HCDG_00325	HCDG_06236	C6H504	C6HI86	DNA polymerase delta small subunit.	DNA polymerase.	0.954
HCDG_00325	HCDG_06510	C6H504	C6HJX9	DNA polymerase delta small subunit.	Uncharacterized protein.	0.825
HCDG_00325	HCDG_06743	C6H504	C6HKL2	DNA polymerase delta small subunit.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.953
HCDG_00325	HCDG_07321	C6H504	C6HMK5	DNA polymerase delta small subunit.	Mitotic spindle checkpoint protein.	0.968
HCDG_00325	HCDG_07529	C6H504	C6HLR0	DNA polymerase delta small subunit.	DNA polymerase.	0.993
HCDG_00325	HCDG_08024	C6H504	C6HP93	DNA polymerase delta small subunit.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.919
HCDG_01727	HCDG_00325	C6H5M6	C6H504	DNA polymerase delta subunit 4.	DNA polymerase delta small subunit.	0.902
HCDG_01727	HCDG_02270	C6H5M6	C6H769	DNA polymerase delta subunit 4.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.518
HCDG_01727	HCDG_03519	C6H5M6	C6HBX0	DNA polymerase delta subunit 4.	DNA polymerase.	0.910
HCDG_01727	HCDG_03533	C6H5M6	C6HBY4	DNA polymerase delta subunit 4.	DUF1237 domain-containing protein.	0.516
HCDG_01727	HCDG_05757	C6H5M6	C6HHS6	DNA polymerase delta subunit 4.	Uncharacterized protein.	0.518
HCDG_01727	HCDG_06236	C6H5M6	C6HI86	DNA polymerase delta subunit 4.	DNA polymerase.	0.518