25 items (Histoplasma capsulatum H143) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCDG_03767	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (543 aa)
	HCDG_04427	Transcription termination factor 2. (536 aa)
	HCDG_04428	SNF2 family helicase/ATPase. (179 aa)
	HCDG_04445	Uncharacterized protein. (189 aa)
	HCDG_04446	Uncharacterized protein. (289 aa)
	HCDG_04935	Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (222 aa)
	HCDG_05943	SNF2 family helicase. (1198 aa)
	HCDG_06781	DNA repair protein rad5. (1034 aa)
	HCDG_08001	Uncharacterized protein. (54 aa)
	HCDG_08064	Plus3 domain-containing protein. (638 aa)
	HCDG_08209	DNA repair and recombination protein RAD5B. (294 aa)
	HCDG_08210	DNA repair and recombination protein RAD5B. (267 aa)
	HCDG_08486	Ubiquitin conjugating enzyme. (371 aa)
	HCDG_08570	Uncharacterized protein. (687 aa)
	HCDG_00951	Polyubiquitin. (305 aa)
	HCDG_02018	RING-13 protein. (1188 aa)
	HCDG_02428	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)
	HCDG_01500	BZIP domain-containing protein. (252 aa)
	HCDG_02576	SNF2 family helicase/ATPase. (1151 aa)
	HCDG_02820	Pre-mRNA-processing protein prp40. (821 aa)
	HCDG_03029	Ubiquitin-conjugating enzyme. (182 aa)
	HCDG_03983	Ubiquitin-conjugating enzyme. (352 aa)
	HCDG_03585	Ubiquitin/79aa fusion protein. (152 aa)
	HCDG_04219	SNF2 family helicase/ATPase. (1028 aa)
	HCDG_04241	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)

Your Current Organism:

Histoplasma capsulatum H143

NCBI taxonomy Id: 544712
Other names: Ajellomyces capsulatus H143, H. capsulatum H143

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCDG_00951	HCDG_01500	C6H2L9	C6H7T9	Polyubiquitin.	BZIP domain-containing protein.	0.969
HCDG_00951	HCDG_02018	C6H2L9	C6H6G7	Polyubiquitin.	RING-13 protein.	0.649
HCDG_00951	HCDG_02428	C6H2L9	C6H7M7	Polyubiquitin.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.982
HCDG_00951	HCDG_02576	C6H2L9	C6H8P5	Polyubiquitin.	SNF2 family helicase/ATPase.	0.750
HCDG_00951	HCDG_02820	C6H2L9	C6H9D9	Polyubiquitin.	Pre-mRNA-processing protein prp40.	0.645
HCDG_00951	HCDG_03029	C6H2L9	C6H9Z8	Polyubiquitin.	Ubiquitin-conjugating enzyme.	0.832
HCDG_00951	HCDG_03585	C6H2L9	C6HC36	Polyubiquitin.	Ubiquitin/79aa fusion protein.	0.993
HCDG_00951	HCDG_03767	C6H2L9	C6HCL8	Polyubiquitin.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.965
HCDG_00951	HCDG_04219	C6H2L9	C6HDD8	Polyubiquitin.	SNF2 family helicase/ATPase.	0.649
HCDG_00951	HCDG_04241	C6H2L9	C6HDG0	Polyubiquitin.	Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.772
HCDG_00951	HCDG_04427	C6H2L9	C6HDZ6	Polyubiquitin.	Transcription termination factor 2.	0.649
HCDG_00951	HCDG_04428	C6H2L9	C6HDZ7	Polyubiquitin.	SNF2 family helicase/ATPase.	0.649
HCDG_00951	HCDG_04445	C6H2L9	C6HE14	Polyubiquitin.	Uncharacterized protein.	0.649
HCDG_00951	HCDG_04446	C6H2L9	C6HE15	Polyubiquitin.	Uncharacterized protein.	0.649
HCDG_00951	HCDG_04935	C6H2L9	C6HER8	Polyubiquitin.	Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.984
HCDG_00951	HCDG_05943	C6H2L9	C6HIQ9	Polyubiquitin.	SNF2 family helicase.	0.649
HCDG_00951	HCDG_06781	C6H2L9	C6HKQ0	Polyubiquitin.	DNA repair protein rad5.	0.649
HCDG_00951	HCDG_08001	C6H2L9	C6HP70	Polyubiquitin.	Uncharacterized protein.	0.942
HCDG_00951	HCDG_08209	C6H2L9	C6HPS8	Polyubiquitin.	DNA repair and recombination protein RAD5B.	0.649
HCDG_00951	HCDG_08210	C6H2L9	C6HPS9	Polyubiquitin.	DNA repair and recombination protein RAD5B.	0.649