Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84084.1 | AEF84598.1 | TREPR_1325 | TREPR_2723 | SalB; Identified by match to protein family HMM PF00111. | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | 0.957 |
| AEF84084.1 | AEF85229.1 | TREPR_1325 | TREPR_2794 | SalB; Identified by match to protein family HMM PF00111. | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | 0.889 |
| AEF84084.1 | iscS | TREPR_1325 | TREPR_2724 | SalB; Identified by match to protein family HMM PF00111. | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | 0.889 |
| AEF84598.1 | AEF84084.1 | TREPR_2723 | TREPR_1325 | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | SalB; Identified by match to protein family HMM PF00111. | 0.957 |
| AEF84598.1 | AEF85229.1 | TREPR_2723 | TREPR_2794 | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | 0.999 |
| AEF84598.1 | iscS | TREPR_2723 | TREPR_2724 | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | 0.999 |
| AEF85229.1 | AEF84084.1 | TREPR_2794 | TREPR_1325 | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | SalB; Identified by match to protein family HMM PF00111. | 0.889 |
| AEF85229.1 | AEF84598.1 | TREPR_2794 | TREPR_2723 | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | 0.999 |
| AEF85229.1 | iscS | TREPR_2794 | TREPR_2724 | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | 0.922 |
| AEF85229.1 | thiI | TREPR_2794 | TREPR_2795 | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.995 |
| iscS | AEF84084.1 | TREPR_2724 | TREPR_1325 | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | SalB; Identified by match to protein family HMM PF00111. | 0.889 |
| iscS | AEF84598.1 | TREPR_2724 | TREPR_2723 | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | 0.999 |
| iscS | AEF85229.1 | TREPR_2724 | TREPR_2794 | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | 0.922 |
| iscS | thiI | TREPR_2724 | TREPR_2795 | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.971 |
| thiI | AEF85229.1 | TREPR_2795 | TREPR_2794 | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Cysteine desulfurase; Identified by match to protein family HMM PF00266. | 0.995 |
| thiI | iscS | TREPR_2795 | TREPR_2724 | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | 0.971 |