Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF80940.1 | nifJ | TREAZ_2628 | TREAZ_1382 | Benzaldehyde dehydrogenase [NAD+]; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.505 |
| AEF81206.1 | nifJ | TREAZ_1815 | TREAZ_1382 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Identified by match to protein family HMM PF01558; match to protein family HMM TIGR02175. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.978 |
| AEF81206.1 | vorB | TREAZ_1815 | TREAZ_1813 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Identified by match to protein family HMM PF01558; match to protein family HMM TIGR02175. | 2-oxoglutarate oxidoreductase, alpha subunit; Identified by match to protein family HMM PF01855; match to protein family HMM PF02780. | 0.997 |
| AEF81310.1 | nifJ | TREAZ_1328 | TREAZ_1382 | Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.978 |
| AEF81310.1 | vorB | TREAZ_1328 | TREAZ_1813 | Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558. | 2-oxoglutarate oxidoreductase, alpha subunit; Identified by match to protein family HMM PF01855; match to protein family HMM PF02780. | 0.583 |
| AEF81908.1 | mmsA | TREAZ_1835 | TREAZ_2306 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Methylmalonate-semialdehyde dehydrogenase (acylating); Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722. | 0.921 |
| AEF81908.1 | nifJ | TREAZ_1835 | TREAZ_1382 | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.505 |
| AEF83172.1 | nifJ | TREAZ_3595 | TREAZ_1382 | Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.978 |
| AEF83172.1 | vorB | TREAZ_3595 | TREAZ_1813 | Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558. | 2-oxoglutarate oxidoreductase, alpha subunit; Identified by match to protein family HMM PF01855; match to protein family HMM PF02780. | 0.668 |
| argC | asd | TREAZ_3347 | TREAZ_1307 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.564 |
| asd | argC | TREAZ_1307 | TREAZ_3347 | Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semialdehyde dehydrogenase family. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.564 |
| gap | nifJ | TREAZ_3383 | TREAZ_1382 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.500 |
| mmsA | AEF81908.1 | TREAZ_2306 | TREAZ_1835 | Methylmalonate-semialdehyde dehydrogenase (acylating); Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722. | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.921 |
| mmsA | nifJ | TREAZ_2306 | TREAZ_1382 | Methylmalonate-semialdehyde dehydrogenase (acylating); Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.896 |
| mmsA | vorB | TREAZ_2306 | TREAZ_1813 | Methylmalonate-semialdehyde dehydrogenase (acylating); Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722. | 2-oxoglutarate oxidoreductase, alpha subunit; Identified by match to protein family HMM PF01855; match to protein family HMM PF02780. | 0.821 |
| nifJ | AEF80940.1 | TREAZ_1382 | TREAZ_2628 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | Benzaldehyde dehydrogenase [NAD+]; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.505 |
| nifJ | AEF81206.1 | TREAZ_1382 | TREAZ_1815 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Identified by match to protein family HMM PF01558; match to protein family HMM TIGR02175. | 0.978 |
| nifJ | AEF81310.1 | TREAZ_1382 | TREAZ_1328 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558. | 0.978 |
| nifJ | AEF81908.1 | TREAZ_1382 | TREAZ_1835 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.505 |
| nifJ | AEF83172.1 | TREAZ_1382 | TREAZ_3595 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558. | 0.978 |
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