STRINGSTRING
nifD nifD AEF80519.1 AEF80519.1 AEF81934.1 AEF81934.1 nifK nifK nifE nifE AEF80250.1 AEF80250.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nifDNitrogenase molybdenum-iron protein alpha chain; Identified by match to protein family HMM PF00148; match to protein family HMM TIGR01282; match to protein family HMM TIGR01862. (545 aa)
AEF80519.1Nitrogenase; Identified by match to protein family HMM PF00148; Belongs to the NifD/NifK/NifE/NifN family. (488 aa)
AEF81934.1Putative oxidoreductase/nitrogenase, component 1; Identified by match to protein family HMM PF00148; Belongs to the NifD/NifK/NifE/NifN family. (473 aa)
nifKNitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. (458 aa)
nifENitrogenase MoFe cofactor biosynthesis protein NifE; Identified by match to protein family HMM PF00148; match to protein family HMM TIGR01283; Belongs to the NifD/NifK/NifE/NifN family. (452 aa)
AEF80250.1Nitrogenase molybdenum-iron protein beta chain (Nitrogenase component I) (Dinitrogenase); Identified by match to protein family HMM PF00148; Belongs to the NifD/NifK/NifE/NifN family. (463 aa)
Your Current Organism:
Treponema azotonutricium
NCBI taxonomy Id: 545695
Other names: T. azotonutricium ZAS-9, Treponema azotonutricium ZAS-9, Treponema azotonutricium str. ZAS-9, Treponema azotonutricium strain ZAS-9, Treponema sp. ZAS-9
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