Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF80156.1 | AEF82065.1 | TREAZ_1503 | TREAZ_1366 | Glycerate kinase; Identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family. | Glycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.937 |
| AEF80164.1 | AEF81397.1 | TREAZ_3169 | TREAZ_3164 | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.960 |
| AEF80164.1 | AEF81656.1 | TREAZ_3169 | TREAZ_3522 | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | 0.903 |
| AEF80164.1 | AEF82449.1 | TREAZ_3169 | TREAZ_0861 | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | Identified by match to protein family HMM PF00330; match to protein family HMM PF00694. | 0.988 |
| AEF80164.1 | AEF82945.1 | TREAZ_3169 | TREAZ_2507 | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.960 |
| AEF80164.1 | lpdA | TREAZ_3169 | TREAZ_3438 | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | 0.430 |
| AEF80810.1 | AEF82077.1 | TREAZ_2961 | TREAZ_2946 | Glutamine synthetase (Glutamate--ammonia ligase) (GS); Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Glycine dehydrogenase (decarboxylating); Identified by match to protein family HMM PF01212; match to protein family HMM PF02347; overlaps another CDS with the same product name. | 0.800 |
| AEF80810.1 | gcvH | TREAZ_2961 | TREAZ_2948 | Glutamine synthetase (Glutamate--ammonia ligase) (GS); Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.800 |
| AEF80810.1 | gcvPA | TREAZ_2961 | TREAZ_2947 | Glutamine synthetase (Glutamate--ammonia ligase) (GS); Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.800 |
| AEF80810.1 | gcvT | TREAZ_2961 | TREAZ_2949 | Glutamine synthetase (Glutamate--ammonia ligase) (GS); Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.800 |
| AEF80810.1 | lpdA | TREAZ_2961 | TREAZ_3438 | Glutamine synthetase (Glutamate--ammonia ligase) (GS); Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | 0.800 |
| AEF80918.1 | AEF82065.1 | TREAZ_3653 | TREAZ_1366 | Thiamine pyrophosphate enzyme; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family. | Glycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.905 |
| AEF80918.1 | AEF82228.1 | TREAZ_3653 | TREAZ_1774 | Thiamine pyrophosphate enzyme; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family. | Khg/kdpg aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182. | 0.900 |
| AEF80918.1 | AEF82750.1 | TREAZ_3653 | TREAZ_2226 | Thiamine pyrophosphate enzyme; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family. | Xylose isomerase domain protein TIM barrel; Identified by match to protein family HMM PF01261; Belongs to the hyi family. | 0.932 |
| AEF81397.1 | AEF80164.1 | TREAZ_3164 | TREAZ_3169 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | 0.960 |
| AEF81397.1 | AEF81656.1 | TREAZ_3164 | TREAZ_3522 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | Conserved hypothetical protein; Identified by match to protein family HMM PF00285. | 0.960 |
| AEF81397.1 | AEF82945.1 | TREAZ_3164 | TREAZ_2507 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.904 |
| AEF81495.1 | AEF82994.1 | TREAZ_0998 | TREAZ_0144 | Glyoxalase family protein. | Glyoxalase family protein. | 0.925 |
| AEF81563.1 | AEF81982.1 | TREAZ_1755 | TREAZ_0859 | Haloacid dehalogenase domain protein hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | Phosphoglycolate phosphatase (PGPase) (PGP); Identified by match to protein family HMM PF00702. | 0.904 |
| AEF81563.1 | AEF82065.1 | TREAZ_1755 | TREAZ_1366 | Haloacid dehalogenase domain protein hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | Glycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.902 |
page 1 of 4