Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF80071.1 | AEF80634.1 | TREAZ_1645 | TREAZ_1647 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | CO dehydrogenase/acetyl-CoA synthase delta subunit. | 0.999 |
| AEF80071.1 | AEF81397.1 | TREAZ_1645 | TREAZ_3164 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.907 |
| AEF80071.1 | AEF81415.1 | TREAZ_1645 | TREAZ_1260 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Identified by match to protein family HMM PF00037. | 0.921 |
| AEF80071.1 | AEF82437.1 | TREAZ_1645 | TREAZ_1534 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | Anaerobic dimethyl sulfoxide reductase, B subunit; Identified by match to protein family HMM PF00037. | 0.900 |
| AEF80071.1 | AEF82945.1 | TREAZ_1645 | TREAZ_2507 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.907 |
| AEF80071.1 | ackA | TREAZ_1645 | TREAZ_3146 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.511 |
| AEF80071.1 | cooS_1 | TREAZ_1645 | TREAZ_1650 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | Carbon-monoxide dehydrogenase, catalytic subunit; Identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702. | 0.989 |
| AEF80071.1 | cooS_2 | TREAZ_1645 | TREAZ_1535 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | Carbon-monoxide dehydrogenase, catalytic subunit; Identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702. | 0.974 |
| AEF80071.1 | pta | TREAZ_1645 | TREAZ_1185 | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | Phosphate acetyltransferase; Identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651. | 0.902 |
| AEF80117.1 | AEF81946.1 | TREAZ_2279 | TREAZ_1866 | Methyltransferase MtaA/CmuA; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | Uroporphyrinogen decarboxylase (URO-D) superfamily; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | 0.928 |
| AEF80117.1 | AEF82337.1 | TREAZ_2279 | TREAZ_1478 | Methyltransferase MtaA/CmuA; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | Dimethylamine corrinoid protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | 0.957 |
| AEF80117.1 | AEF82644.1 | TREAZ_2279 | TREAZ_1481 | Methyltransferase MtaA/CmuA; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | 0.929 |
| AEF80117.1 | AEF83121.1 | TREAZ_2279 | TREAZ_1477 | Methyltransferase MtaA/CmuA; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | Methyltransferase MtaA/CmuA family; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | 0.927 |
| AEF80634.1 | AEF80071.1 | TREAZ_1647 | TREAZ_1645 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | CO dehydrogenase/acetyl-CoA synthase delta subunit; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | 0.999 |
| AEF80634.1 | AEF81397.1 | TREAZ_1647 | TREAZ_3164 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.908 |
| AEF80634.1 | AEF81415.1 | TREAZ_1647 | TREAZ_1260 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Identified by match to protein family HMM PF00037. | 0.924 |
| AEF80634.1 | AEF82437.1 | TREAZ_1647 | TREAZ_1534 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Anaerobic dimethyl sulfoxide reductase, B subunit; Identified by match to protein family HMM PF00037. | 0.901 |
| AEF80634.1 | AEF82945.1 | TREAZ_1647 | TREAZ_2507 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.908 |
| AEF80634.1 | ackA | TREAZ_1647 | TREAZ_3146 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.499 |
| AEF80634.1 | cooS_1 | TREAZ_1647 | TREAZ_1650 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Carbon-monoxide dehydrogenase, catalytic subunit; Identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702. | 0.993 |
page 1 of 6