STRINGSTRING
AEB99064.1 AEB99064.1 AEB99065.1 AEB99065.1 AEB99092.1 AEB99092.1 AEB99113.1 AEB99113.1 AEB99123.1 AEB99123.1 AEB99192.1 AEB99192.1 AEB99193.1 AEB99193.1 AEB99208.1 AEB99208.1 AEB99210.1 AEB99210.1 AEB99234.1 AEB99234.1 AEB99235.1 AEB99235.1 AEB99288.1 AEB99288.1 AEB99290.1 AEB99290.1 AEB99291.1 AEB99291.1 AEB99292.1 AEB99292.1 flgK flgK flgL flgL AEB99295.1 AEB99295.1 fliW fliW csrA csrA flaG flaG AEB99299.1 AEB99299.1 fliS fliS AEB99301.1 AEB99301.1 AEB99302.1 AEB99302.1 AEB99401.1 AEB99401.1 AEB99405.1 AEB99405.1 mcpA mcpA AEB99431.1 AEB99431.1 AEB99432.1 AEB99432.1 AEB99433.1 AEB99433.1 AEB99465.1 AEB99465.1 mcpA-2 mcpA-2 AEB99467.1 AEB99467.1 AEB99468.1 AEB99468.1 AEB99469.1 AEB99469.1 AEB99580.1 AEB99580.1 AEB99640.1 AEB99640.1 AEB99644.1 AEB99644.1 AEB99651.1 AEB99651.1 AEB99665.1 AEB99665.1 AEB99711.1 AEB99711.1 AEB99734.1 AEB99734.1 AEB99735.1 AEB99735.1 AEB99764.1 AEB99764.1 AEB99765.1 AEB99765.1 cheY cheY AEB99767.1 AEB99767.1 map map AEB99770.1 AEB99770.1 pepD pepD AEB99872.1 AEB99872.1 AEB99873.1 AEB99873.1 cheR cheR AEC00244.1 AEC00244.1 AEC00245.1 AEC00245.1 AEC00367.1 AEC00367.1 AEC00368.1 AEC00368.1 AEC00369.1 AEC00369.1 AEC00507.1 AEC00507.1 AEC00526.1 AEC00526.1 AEC00527.1 AEC00527.1 AEC00528.1 AEC00528.1 AEC00529.1 AEC00529.1 AEC00530.1 AEC00530.1 trmB trmB AEC00533.1 AEC00533.1 AEC00534.1 AEC00534.1 AEC00539.1 AEC00539.1 AEC00569.1 AEC00569.1 AEC00570.1 AEC00570.1 AEC00611.1 AEC00611.1 AEC00614.1 AEC00614.1 AEC00615.1 AEC00615.1 AEC00625.1 AEC00625.1 AEC00626.1 AEC00626.1 AEC00627.1 AEC00627.1 AEC00628.1 AEC00628.1 AEC00629.1 AEC00629.1 cheD cheD AEC00631.1 AEC00631.1 AEC00632.1 AEC00632.1 AEC00633.1 AEC00633.1 AEC00634.1 AEC00634.1 AEC00635.1 AEC00635.1 AEC00636.1 AEC00636.1 flhA flhA flhB flhB fliR fliR fliQ fliQ fliP fliP fliO fliO AEC00643.1 AEC00643.1 fliN fliN fliM fliM fliL fliL AEC00647.1 AEC00647.1 AEC00648.1 AEC00648.1 AEC00649.1 AEC00649.1 flgD flgD fliK fliK AEC00652.1 AEC00652.1 fliJ fliJ fliI fliI fliH fliH fliG fliG fliF fliF fliE fliE flgC flgC flgB flgB AEC00689.1 AEC00689.1 AEC00735.1 AEC00735.1 AEC00736.1 AEC00736.1 AEC00862.1 AEC00862.1 AEC00863.1 AEC00863.1 AEC00864.1 AEC00864.1 AEC00866.1 AEC00866.1 AEC00899.1 AEC00899.1 AEC00905.1 AEC00905.1 flgI flgI flgH flgH flgA flgA flgG flgG AEC00915.1 AEC00915.1 cheB cheB AEC01009.1 AEC01009.1 AEC01010.1 AEC01010.1 AEC01011.1 AEC01011.1 AEC01051.1 AEC01051.1 AEC01052.1 AEC01052.1 AEC01059.1 AEC01059.1 AEC01107.1 AEC01107.1 AEC01156.1 AEC01156.1 AEC01157.1 AEC01157.1 AEC01158.1 AEC01158.1 phnD phnD AEC01161.1 AEC01161.1 AEC01216.1 AEC01216.1 AEC01219.1 AEC01219.1 AEC00212.1 AEC00212.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEB99064.1Diguanylate cyclase with extracellular sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR001638; KEGG: cdf:CD1476 putative signaling protein; PFAM: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504585537; PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain. (737 aa)
AEB99065.1Tetratricopeptide TPR_2 repeat-containing protein; InterPro IPR019734:IPR013105:IPR001440; KEGG: afn:Acfer_1229 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Putative lipoprotein; IMG reference gene:2504585538; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Tetratricopeptide repeat. (448 aa)
AEB99092.1COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: amt:Amet_3255 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Chemotaxis protein CheY; IMG reference gene:2504585565; PFAM: Response regulator receiver domain. (128 aa)
AEB99113.1COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712:IPR008595; KEGG: nth:Nther_2326 histidine kinase; PFAM: Sensor DegS; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase; IMG reference gene:2504585587; PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (425 aa)
AEB99123.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: tro:trd_A0295 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585597; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (503 aa)
AEB99192.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: ctc:CTC01487 methyl-accepting chemotaxis-like protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585672; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (280 aa)
AEB99193.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: cbt:CLH_2034 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SPTR: Putative sensory box protein/GGDEF domain protein; IMG reference gene:2504585673; PFAM: GGDEF domain. (304 aa)
AEB99208.1Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: bpb:bpr_I1677 GGDEF/EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; SPTR: Putative sensory box sensor/GGDEF/EAL domain protein; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504585689; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (671 aa)
AEB99210.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: gmc:GY4MC1_2562 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: TlpA protein; IMG reference gene:2504585691; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (576 aa)
AEB99234.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: mta:Moth_2263 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2504585715; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG. (392 aa)
AEB99235.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: mta:Moth_2263 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2504585716; PFAM: HD domain. (388 aa)
AEB99288.1ArsC family protein; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006504:IPR006660; KEGG: cth:Cthe_1508 hypothetical protein; PFAM: Arsenate reductase-like; SPTR: ArsC family protein; TIGRFAM: Transcriptional regulator Spx/MgsR; IMG reference gene:2504585773; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family. (119 aa)
AEB99290.1InterPro IPR007412; PFAM: Anti-sigma-28 factor, FlgM; SPTR: Negative regulator of flagellin synthesis FlgM; IMG reference gene:2504585775; PFAM: Anti-sigma-28 factor, FlgM. (97 aa)
AEB99291.1FlgN family protein; InterPro IPR007809; PFAM: FlgN-like domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504585776; PFAM: FlgN protein. (161 aa)
AEB99292.1FlgN family protein; InterPro IPR007809; KEGG: toc:Toce_1598 FlgN family protein; PFAM: FlgN-like domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504585777; PFAM: FlgN protein. (157 aa)
flgKCOGs: COG1256 Flagellar hook-associated protein; InterPro IPR010930:IPR002371; KEGG: adg:Adeg_0248 flagellar hook-associated protein FlgK; PFAM: Domain of unknown function DUF1078, C-terminal; SPTR: Flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; IMG reference gene:2504585778; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK. (571 aa)
flgLCOGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001029:IPR013384; KEGG: aoe:Clos_2520 flagellar hook-associated protein 3; PFAM: Flagellin, D0/D1 domain; SPTR: Flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; IMG reference gene:2504585779; PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3. (446 aa)
AEB99295.1SPTR: Putative uncharacterized protein; IMG reference gene:2504585780. (196 aa)
fliWFlagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (156 aa)
csrACarbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (74 aa)
flaGCOGs: COG1334 Uncharacterized flagellar protein FlaG; InterPro IPR005186; KEGG: aae:aq_2000 hypothetical protein; PFAM: Flagellar protein FlaG protein; SPTR: FlaG protein; IMG reference gene:2504585783; PFAM: FlaG protein. (175 aa)
AEB99299.1Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (570 aa)
fliSFlagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: cth:Cthe_2217 flagellar protein FliS; PFAM: Flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: Flagellar protein FliS; IMG reference gene:2504585785; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS. (149 aa)
AEB99301.1KEGG: dhd:Dhaf_4162 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504585786. (111 aa)
AEB99302.1Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (437 aa)
AEB99401.1Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (452 aa)
AEB99405.1Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (274 aa)
mcpAMethyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004010; KEGG: bld:BLi02183 TlpB; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585917; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (655 aa)
AEB99431.1NUDIX hydrolase; InterPro IPR000086; KEGG: ere:EUBREC_0178 mutator MutT protein; PFAM: NUDIX hydrolase domain; SPTR: Mutator MutT protein; IMG reference gene:2504585918; PFAM: NUDIX domain. (155 aa)
AEB99432.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004010; KEGG: bao:BAMF_2923 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein signaling domain protein; IMG reference gene:2504585919; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (658 aa)
AEB99433.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004010:IPR004089; KEGG: bbe:BBR47_11740 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585920; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (654 aa)
AEB99465.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004010; KEGG: tmt:Tmath_0501 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585952; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (656 aa)
mcpA-2Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004010:IPR004089; KEGG: bpf:BpOF4_05865 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585953; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (655 aa)
AEB99467.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004010; KEGG: bcy:Bcer98_1516 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein signaling domain protein; IMG reference gene:2504585954; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (656 aa)
AEB99468.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004010; KEGG: bpf:BpOF4_19984 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585955; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (656 aa)
AEB99469.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004010:IPR004089; KEGG: btk:BT9727_0469 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504585956; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (655 aa)
AEB99580.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR013163; KEGG: bpb:bpr_I1155 methyl-accepting chemotaxis protein McpK; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504586069; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (597 aa)
AEB99640.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: gmc:GY4MC1_0706 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis protein; IMG reference gene:2504586133; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (563 aa)
AEB99644.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR013655:IPR004089:IPR001610; KEGG: bpu:BPUM_3598 sensor histidine kinase; PFAM: PAS fold-3; Chemotaxis methyl-accepting receptor, signalling; SMART: PAC motif; Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis protein; IMG reference gene:2504586137; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box. (498 aa)
AEB99651.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_0820 GGDEF domain-containing protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: GGDEF domain protein; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504586144; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (648 aa)
AEB99665.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: dhd:Dhaf_2112 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis protein; IMG reference gene:2504586159; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (572 aa)
AEB99711.1Response regulator receiver modulated CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789:IPR002545; KEGG: afl:Aflv_1927 chemotaxis protein CheV (CheW-REC domains); PFAM: CheW-like protein; Signal transduction response regulator, receiver domain; SMART: CheW-like protein; Signal transduction response regulator, receiver domain; SPTR: Chemotaxis protein CheV; IMG reference gene:2504586207; PFAM: CheW-like domain; Response regulator receiver domain. (319 aa)
AEB99734.1SPTR: Putative uncharacterized protein; IMG reference gene:2504586232. (69 aa)
AEB99735.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004010:IPR003660:IPR004089; KEGG: cbi:CLJ_B0457 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein signaling domain protein; IMG reference gene:2504586233; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (650 aa)
AEB99764.1Helix-turn-helix domain protein; InterPro IPR001387; PFAM: Helix-turn-helix type 3; SPTR: Toxin-antitoxin system, antitoxin component, Xre family; IMG reference gene:2504586263; PFAM: Helix-turn-helix. (50 aa)
AEB99765.1COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR006076; KEGG: hmo:HM1_1957 fad dependent oxidoreductase, putative; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; IMG reference gene:2504586264; PFAM: FAD dependent oxidoreductase. (461 aa)
cheYCOGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789; KEGG: cst:CLOST_1623 CheY-related protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Chemotaxis protein CheY; IMG reference gene:2504586265; PFAM: Response regulator receiver domain. (296 aa)
AEB99767.1CheC domain protein; COGs: COG1406 inhibitor of MCP methylation homolog of CheC; InterPro IPR007597; KEGG: cbi:CLJ_B1966 chemotaxis protein CheX; PFAM: CheC-like protein; SPTR: Putative chemotaxis protein CheX; IMG reference gene:2504586266; PFAM: CheC-like family. (154 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (291 aa)
AEB99770.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004010:IPR003660:IPR004089; KEGG: hmo:HM1_3092 methyl-accepting chemotaxis signaling protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504586269; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (654 aa)
pepDAminoacyl-histidine dipeptidase; COGs: COG2195 Di- and tripeptidase; InterPro IPR001160:IPR002933; KEGG: aba:Acid345_1504 peptidase M20C, Xaa-His dipeptidase; PFAM: Peptidase M20; PRIAM: Xaa-His dipeptidase; SPTR: Aminoacyl-histidine dipeptidase; TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; IMG reference gene:2504586375; PFAM: Peptidase family M20/M25/M40; TIGRFAM: aminoacyl-histidine dipeptidase. (482 aa)
AEB99872.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: ctc:CTC01487 methyl-accepting chemotaxis-like protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504586381; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (284 aa)
AEB99873.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: cbl:CLK_2081 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504586382; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (282 aa)
cheRMCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR022641:IPR022642:IPR000780; KEGG: nth:Nther_1604 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase, CheR-type; SPTR: CheR methyltransferase, SAM binding domain protein; IMG reference gene:2504586678; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain. (262 aa)
AEC00244.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006675:IPR006674; KEGG: cth:Cthe_0898 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative HD domain protein; IMG reference gene:2504586765; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG. (378 aa)
AEC00245.1Hpt protein; KEGG: ele:Elen_2024 Hpt protein; SPTR: Putative hybrid sensory kinase; IMG reference gene:2504586766; PFAM: Hpt domain. (116 aa)
AEC00367.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR021812:IPR003607:IPR006674; KEGG: cth:Cthe_0898 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Protein of unknown function DUF3391; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative HD-GYP domain containing protein; IMG reference gene:2504586890; PFAM: Domain of unknown function (DUF3391); HD domain. (457 aa)
AEC00368.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674; KEGG: nth:Nther_2124 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SPTR: Putative HD domain protein; IMG reference gene:2504586891; PFAM: HD domain. (388 aa)
AEC00369.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: hor:Hore_22020 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative HD-GYP domain containing protein; IMG reference gene:2504586892; PFAM: HD domain. (438 aa)
AEC00507.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660; KEGG: cbl:CLK_0094 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504587035; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (714 aa)
AEC00526.1Protein of unknown function DUF2179; COGs: COG1284 conserved hypothetical protein; InterPro IPR019264:IPR003740; KEGG: cbi:CLJ_B1141 hypothetical protein; PFAM: Domain of unknown function DUF2179; Protein of unknown function DUF161; SPTR: Transporter; IMG reference gene:2504587055; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179). (308 aa)
AEC00527.1COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: vpr:Vpar_1183 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family; IMG reference gene:2504587056; PFAM: Glycosyl transferase family 2. (340 aa)
AEC00528.1COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: afn:Acfer_0937 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; SPTR: Sensor histidine kinase; IMG reference gene:2504587057; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (412 aa)
AEC00529.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: afn:Acfer_0936 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: DNA-binding response regulator DltR; IMG reference gene:250458705 [...] (222 aa)
AEC00530.1RelA/SpoT domain protein; COGs: COG2357 conserved hypothetical protein; InterPro IPR007685; KEGG: smc:SmuNN2025_1101 hypothetical protein; PFAM: RelA/SpoT; SMART: RelA/SpoT; SPTR: RelA/SpoT domain protein; IMG reference gene:2504587059; PFAM: Region found in RelA / SpoT proteins. (211 aa)
trmBtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (216 aa)
AEC00533.1Sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR003593:IPR002197; KEGG: afn:Acfer_0116 sigma54 specific transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; IMG reference gene:2504587062; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (637 aa)
AEC00534.1SPTR: Putative uncharacterized protein; IMG reference gene:2504587063. (111 aa)
AEC00539.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633:IPR001610:IPR013655; KEGG: elm:ELI_1550 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-3; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAC motif; SPTR: Putative pas:ggdef protein; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504587068; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDE [...] (580 aa)
AEC00569.1OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: gym:GYMC10_0086 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Chemotaxis protein MotB; IMG reference gene:2504587098; PFAM: OmpA family. (303 aa)
AEC00570.1MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898; KEGG: bbe:BBR47_08690 flagellar motor protein MotA; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Chemotaxis protein MotA; IMG reference gene:2504587099; PFAM: MotA/TolQ/ExbB proton channel family. (258 aa)
AEC00611.1Telomeric repeat-binding factor 2; InterPro IPR021652; KEGG: kse:Ksed_06230 hypothetical protein; PFAM: Telomeric repeat-binding factor 2; SPTR: rRNA-processing protein cgr-1; IMG reference gene:2504587143; PFAM: Telomeric repeat-binding factor 2. (218 aa)
AEC00614.1Methyl-accepting chemotaxis sensory transducer with HNOB (heme) sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR011644:IPR004089; KEGG: cno:NT01CX_1000 methyl-accepting chemotaxis protein; PFAM: Haem NO binding; Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative methyl-accepting chemotaxis protein; IMG reference gene:2504587146; PFAM: Heme NO binding; Methyl-accepting chemotaxis protein (MCP) signaling domain. (598 aa)
AEC00615.1GtrA family protein; InterPro IPR007267; KEGG: cbe:Cbei_2531 GtrA family protein; PFAM: GtrA-like protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504587147; PFAM: GtrA-like protein. (133 aa)
AEC00625.1Hypothetical protein; KEGG: hoh:Hoch_3149 ATP-dependent DNA helicase, RecQ family; SPTR: Putative uncharacterized protein; IMG reference gene:2504587159. (352 aa)
AEC00626.1KEGG: hmo:HM1_2253 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504587160. (110 aa)
AEC00627.1Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: toc:Toce_1126 protein of unknown function DUF342; PFAM: Protein of unknown function DUF342; SPTR: Putative uncharacterized protein; IMG reference gene:2504587161; PFAM: Protein of unknown function (DUF342). (463 aa)
AEC00628.1RNA polymerase, sigma 28 subunit, FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (252 aa)
AEC00629.1SPTR: Putative uncharacterized protein; IMG reference gene:2504587163. (128 aa)
cheDCheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (161 aa)
AEC00631.1COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: slp:Slip_0980 CheC, inhibitor of MCP methylation; PFAM: CheC-like protein; SPTR: Chemotaxis protein CheC; IMG reference gene:2504587165; PFAM: CheC-like family. (205 aa)
AEC00632.1CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: hmo:HM1_2248 purine-binding chemotaxis protein CheW; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: Chemotaxis protein CheW; IMG reference gene:2504587166; PFAM: CheW-like domain. (153 aa)
AEC00633.1CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR010808:IPR004105:IPR003594:IPR 002545; KEGG: hmo:HM1_2247 CheA signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, P2 response regulator-binding; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; ATPase-like, ATP-binding domain; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase- [...] (699 aa)
AEC00634.1Type IV pilus assembly PilZ; COGs: COG5581 glycosyltransferase; InterPro IPR009875; KEGG: nth:Nther_1416 type IV pilus assembly PilZ; PFAM: Type IV pilus assembly PilZ; SPTR: Type IV pilus assembly protein PilZ; IMG reference gene:2504587168; PFAM: PilZ domain. (227 aa)
AEC00635.1Cobyrinic acid ac-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: amt:Amet_2701 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Flagellar synthesis regulator FleN; IMG reference gene:2504587169; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (309 aa)
AEC00636.1GTP-binding signal recognition particle SRP54 G- domain protein; COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: gym:GYMC10_4170 flagellar biosynthetic protein FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: Signal recognition particle, SRP54 subunit, GTPase; ATPase, AAA+ type, core; SPTR: Flagellar biosynthesis protein FlhF; IMG reference gene:2504587170; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF. (578 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (690 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (366 aa)
fliRFlagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (260 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (252 aa)
fliOInterPro IPR022781; KEGG: dma:DMR_46190 putative flagellar protein FliO; PFAM: Flagellar biosynthesis protein, FliO; SPTR: Putative flagellar biosynthesis protein, FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; IMG reference gene:2504587176; PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO. (184 aa)
AEC00643.1COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: tjr:TherJR_1528 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Sporulation initiation phosphotransferase F; IMG reference gene:2504587177; PFAM: Response regulator receiver domain. (120 aa)
fliNCOGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597:IPR001543:IPR012826; KEGG: tjr:TherJR_1529 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: Surface presentation of antigen (SpoA); CheC-like protein; SPTR: Flagellar motor switch phosphatase FliY; TIGRFAM: Flagellar motor switch FliN; IMG reference gene:2504587178; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN. (394 aa)
fliMCOGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543; KEGG: tjr:TherJR_1530 flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; IMG reference gene:2504587179; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM. (334 aa)
fliLFlagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (169 aa)
AEC00647.1Flagellar FlbD family protein; COGs: COG1582 Uncharacterized protein possibly involved in motility; InterPro IPR009384; KEGG: sth:STH1485 putative flagellar protein; PFAM: Flagellar; SPTR: Putative flagellar protein FlbD; IMG reference gene:2504587181; PFAM: Flagellar protein (FlbD). (66 aa)
AEC00648.1COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR010930:IPR020013:IPR011491:IPR001444; KEGG: hmo:HM1_2230 flagellar hook protein; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; IMG reference gene:2504587182; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins. (496 aa)
AEC00649.1Flagellar operon protein; InterPro IPR013367; KEGG: hmo:HM1_2229 flagellar operon protein, putative; PFAM: Flagellar, putative; SPTR: Flagellar operon protein; TIGRFAM: Flagellar, putative; IMG reference gene:2504587183; PFAM: Protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein. (124 aa)
flgDCOGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: bse:Bsel_1748 flagellar hook capping protein; PFAM: Flagellar hook capping protein; SPTR: Flagellar hook capping protein; IMG reference gene:2504587184; PFAM: Flagellar hook capping protein. (178 aa)
fliKInterPro IPR021136; KEGG: ppm:PPSC2_c2094 flagellar hook-length control protein; PFAM: Flagellar hook-length control protein-like, C-terminal domain; SPTR: Putative flagellar hook-length control protein; IMG reference gene:2504587185; PFAM: Flagellar hook-length control protein FliK. (575 aa)
AEC00652.1MgtE intracellular region; InterPro IPR006668; KEGG: nth:Nther_1396 hypothetical protein; PFAM: Magnesium transporter, MgtE intracellular domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504587186; PFAM: MgtE intracellular N domain. (210 aa)
fliJInterPro IPR012823; KEGG: slp:Slip_0957 flagellar export protein FliJ; PFAM: Flagellar export FliJ; SPTR: Flagellar export protein FliJ; TIGRFAM: Flagellar export FliJ; IMG reference gene:2504587188; PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ. (150 aa)
fliIATPase, FliI/YscN family; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterProIPR003593:IPR004100:IPR000194:IPR005714:IPR 022425; KEGG: tjr:TherJR_1539 flagellar protein export ATPase FliI; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellar protein export ATPase FliI; TIGRFAM: ATPase, type III secretion system, FliI/YscN; Flagellar export ATPase, FliI, clade 2; IMG reference gene:2504587189; PFAM: ATP [...] (475 aa)
fliHFlagellar assembly protein FliH/Type III secretion system HrpE; COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein; InterPro IPR018035; KEGG: hmo:HM1_2223 flagellar assembly protein FliH, putative; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: Putative flagellar assembly protein FliH; IMG reference gene:2504587190; PFAM: Flagellar assembly protein FliH. (263 aa)
fliGCOGs: COG1536 Flagellar motor switch protein; InterPro IPR006668:IPR023087:IPR000090; KEGG: tjr:TherJR_1541 flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG, C-terminal; Magnesium transporter, MgtE intracellular domain; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; IMG reference gene:2504587191; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG. (338 aa)
fliFFlagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (529 aa)
fliECOGs: COG1677 Flagellar hook-basal body protein; InterPro IPR001624; KEGG: hmo:HM1_2220 flagellar hook-basal body complex protein FliE, putative; PFAM: Flagellar hook-basal body complex protein FliE; SPTR: Flagellar hook-basal body complex protein fliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; IMG reference gene:2504587193; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE. (99 aa)
flgCCOGs: COG1558 Flagellar basal body rod protein; InterPro IPR010930:IPR006299:IPR001444; KEGG: toc:Toce_1093 flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; IMG reference gene:2504587194; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC. (147 aa)
flgBFlagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (137 aa)
AEC00689.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: hor:Hore_22020 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative HD-GYP hydrolase domain containing protein; IMG reference gene:2504587223; PFAM: HD domain. (374 aa)
AEC00735.1KEGG: plt:Plut_0838 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504587270. (255 aa)
AEC00736.1InterPro IPR006597; PFAM: Sel1-like; SPTR: Sel1 repeat family protein; IMG reference gene:2504587271; PFAM: Sel1 repeat. (696 aa)
AEC00862.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: slp:Slip_1365 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative methyl-accepting chemotaxis protein signaling domain protein; IMG reference gene:2504587403; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (585 aa)
AEC00863.1COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: vpr:Vpar_0306 UspA domain protein; PFAM: UspA; SPTR: Universal stress protein; IMG reference gene:2504587404; PFAM: Universal stress protein family. (148 aa)
AEC00864.1RNA polymerase sigma factor, sigma-70 family; InterPro IPR014284:IPR007627:IPR007630; KEGG: ttm:Tthe_0707 putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; SPTR: DNA-directed RNA polymerase general stress sigma factor sigma-B; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504587405; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. (183 aa)
AEC00866.1Metallophosphoesterase; InterPro IPR006186:IPR004843; KEGG: sat:SYN_00526 calcineurin-like phosphoesterase; PFAM: Metallo-dependent phosphatase; SMART: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase; SPTR: Ser/Thr protein phosphatase family protein; IMG reference gene:2504587407; PFAM: Calcineurin-like phosphoesterase. (224 aa)
AEC00899.1GGDEF domain containing protein; InterPro IPR000160; KEGG: cbt:CLH_2034 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SPTR: Putative GGDEF domain protein; IMG reference gene:2504587442; PFAM: GGDEF domain. (292 aa)
AEC00905.1Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: amt:Amet_3141 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator DegU; IMG reference gene:2504587448; PFAM: Response regulator receiver domain; Bacte [...] (223 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (370 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (201 aa)
flgAFlagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (244 aa)
flgGCOGs: COG4786 Flagellar basal body rod protein; InterPro IPR010930:IPR020013:IPR012834:IPR001444; KEGG: tai:Taci_1147 flagellar basal-body rod protein FlgG; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; IMG reference gene:2504587458; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative b [...] (263 aa)
AEC00915.1COGs: COG4786 Flagellar basal body rod protein; InterPro IPR010930:IPR020013:IPR001444; KEGG: tjr:TherJR_2882 flagellar basal-body rod protein FlgF; PFAM: Flagellar basal body rod protein, N-terminal; Domain of unknown function DUF1078, C-terminal; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; IMG reference gene:2504587459; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins. (264 aa)
cheBCheB methylesterase; COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR000673; KEGG: cbe:Cbei_4826 response regulator receiver modulated CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; PRIAM: Protein-glutamate methylesterase; SPTR: Chemotaxis response regulator protein-glutamate methylesterase; manually curated; IMG reference gene:2504587513; PFAM: CheB methylesterase. (223 aa)
AEC01009.1COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003594:IPR003661; KEGG: tjr:TherJR_2683 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Two component system histidine kinase; IMG reference gene:2504587577; PFAM: HAMP domain; Histidine kinase-, DNA gyra [...] (474 aa)
AEC01010.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: aar:Acear_1915 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: DNA-binding response regulator YycF; IMG reference gene:250458757 [...] (254 aa)
AEC01011.1Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: clj:CLJU_c42440 putative LysR family transcriptional regulator; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family; IMG reference gene:2504587579; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain. (291 aa)
AEC01051.1COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003660:IPR003594:IPR003661; KEGG: afn:Acfer_0160 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Sensor histidine kinase; IMG reference gene:2504587619; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP9 [...] (500 aa)
AEC01052.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: elm:ELI_4390 response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Alkaline phosphatase synthes [...] (234 aa)
AEC01059.1Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR001789:IPR000160; KEGG: elm:ELI_3413 hypothetical protein; PFAM: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; SPTR: Putative hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference g [...] (567 aa)
AEC01107.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: cbe:Cbei_2787 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis protein; IMG reference gene:2504587677; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (574 aa)
AEC01156.1KEGG: rci:RRC32 hypothetical protein; SPTR: ATP-dependent DNA helicase RecG; IMG reference gene:2504587727. (347 aa)
AEC01157.1Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: dma:DMR_15450 NarL family two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator UhpA; IMG reference gene:2504587728; PFAM: Response regulator receiver domain; Bacterial re [...] (216 aa)
AEC01158.1COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: dma:DMR_15440 two-component sensor histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Sensor histidine kinase; IMG reference gene:2504587729; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (414 aa)
phnDCOGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: dma:DMR_15430 hypothetical protein; SPTR: Putative phosphonate-binding periplasmic protein; TIGRFAM: Phosphonate-binding periplasmic protein; IMG reference gene:2504587730; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein. (304 aa)
AEC01161.1Glycosyl transferase family 2; InterPro IPR001173; KEGG: bpb:bpr_I0357 glycosyl transferase GT2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Putative glycosyl transferase; IMG reference gene:2504587732; PFAM: Glycosyl transferase family 2. (472 aa)
AEC01216.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR013702:IPR019494; KEGG: lhk:LHK_01115 GGDEF domain protein; PFAM: Diguanylate cyclase, predicted; FIST C domain; FIST domain, N-terminal; SMART: Diguanylate cyclase, predicted; FIST domain, N-terminal; SPTR: Putative sensory box-containing diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504587789; PFAM: FIST C domain; GGDEF domain; FIST N domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (589 aa)
AEC01219.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR001610; KEGG: elm:ELI_4129 putative GGDEF domain protein; PFAM: Diguanylate cyclase, predicted; SMART: PAC motif; SPTR: Putative diguanylate cyclase domain protein; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504587792; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (338 aa)
AEC00212.1Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: ele:Elen_1281 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; SPTR: Putative sensory box sensor/GGDEF/EAL domain protein; tmRNA as predicted by Rfam (RF00023), score 184.64; IMG reference gene:2504586733; PFAM: EAL domain; GGDEF domain. (749 aa)
Your Current Organism:
Selenomonas sputigena
NCBI taxonomy Id: 546271
Other names: S. sputigena ATCC 35185, Selenomonas sputigena ATCC 35185, Selenomonas sputigena DSM 20758, Selenomonas sputigena HMP_JCVI_SC0180, Selenomonas sputigena str. ATCC 35185, Selenomonas sputigena strain ATCC 35185
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.