STRINGSTRING
AEC01219.1 AEC01219.1 AEB99193.1 AEB99193.1 AEB99208.1 AEB99208.1 AEC00899.1 AEC00899.1 AEC00998.1 AEC00998.1 AEC01059.1 AEC01059.1 AEC00212.1 AEC00212.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEC01219.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR001610; KEGG: elm:ELI_4129 putative GGDEF domain protein; PFAM: Diguanylate cyclase, predicted; SMART: PAC motif; SPTR: Putative diguanylate cyclase domain protein; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504587792; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (338 aa)
AEB99193.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: cbt:CLH_2034 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SPTR: Putative sensory box protein/GGDEF domain protein; IMG reference gene:2504585673; PFAM: GGDEF domain. (304 aa)
AEB99208.1Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: bpb:bpr_I1677 GGDEF/EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; SPTR: Putative sensory box sensor/GGDEF/EAL domain protein; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504585689; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (671 aa)
AEC00899.1GGDEF domain containing protein; InterPro IPR000160; KEGG: cbt:CLH_2034 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SPTR: Putative GGDEF domain protein; IMG reference gene:2504587442; PFAM: GGDEF domain. (292 aa)
AEC00998.1Diguanylate cyclase and phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. (677 aa)
AEC01059.1Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR001789:IPR000160; KEGG: elm:ELI_3413 hypothetical protein; PFAM: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; SPTR: Putative hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference g [...] (567 aa)
AEC00212.1Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: ele:Elen_1281 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; SPTR: Putative sensory box sensor/GGDEF/EAL domain protein; tmRNA as predicted by Rfam (RF00023), score 184.64; IMG reference gene:2504586733; PFAM: EAL domain; GGDEF domain. (749 aa)
Your Current Organism:
Selenomonas sputigena
NCBI taxonomy Id: 546271
Other names: S. sputigena ATCC 35185, Selenomonas sputigena ATCC 35185, Selenomonas sputigena DSM 20758, Selenomonas sputigena HMP_JCVI_SC0180, Selenomonas sputigena str. ATCC 35185, Selenomonas sputigena strain ATCC 35185
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