STRINGSTRING
Nmag_0078 Nmag_0078 Nmag_2253 Nmag_2253 Nmag_2821 Nmag_2821 sph2 sph2 Nmag_3003 Nmag_3003 Nmag_3112 Nmag_3112
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Nmag_0078KEGG: hut:Huta_0906 uncharacterized protein. (261 aa)
Nmag_2253PFAM: protein of unknown function DUF309; KEGG: hmu:Hmuk_0568 protein of unknown function DUF309. (204 aa)
Nmag_2821Abi/CAAX domain protein; PFAM: Abortive infection protein; KEGG: hwa:HQ1162A uncharacterized protein. (340 aa)
sph2Smc-like protein Sph2; PFAM: Kinetochore-Ndc80 complex, subunit Spc25; KEGG: nph:NP4262A homolog 1 to rad50 ATPase. (661 aa)
Nmag_3003Uncharacterized protein. (694 aa)
Nmag_3112HTH-10 family transcription regulator; PFAM: Bacterio-opsin activator HTH domain protein; KEGG: hma:pNG6134 transcription regulator. (262 aa)
Your Current Organism:
Natrialba magadii
NCBI taxonomy Id: 547559
Other names: N. magadii ATCC 43099, Natrialba magadii ATCC 43099, Natrialba magadii DSM 3394, Natrialba magadii MS3, Natrialba magadii NCIMB 2190, Natrialba magadii str. ATCC 43099, Natrialba magadii strain ATCC 43099
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