STRINGSTRING
Cantr_09205 Cantr_09205 TAF13 TAF13 DPB4_1 DPB4_1 TAF8_1 TAF8_1 ncb2_1 ncb2_1 Cantr_04664 Cantr_04664 HTA2_0 HTA2_0 DPB3_0 DPB3_0 HHT1_0 HHT1_0 H4_0 H4_0 taf11_1 taf11_1 CSE4_1 CSE4_1 HTB2_2 HTB2_2 Cantr_06126 Cantr_06126 TAF6_1 TAF6_1 BUR6 BUR6 Cantr_07706 Cantr_07706 Cantr_07766 Cantr_07766 NFYB8 NFYB8 TAF3_0 TAF3_0 HAP3_0 HAP3_0 TAF9_0 TAF9_0 DPB3_1 DPB3_1 HTB2_3 HTB2_3 HTZ1_1 HTZ1_1 TAF12 TAF12 HAP3_1 HAP3_1 TAF3_1 TAF3_1 MHF1_0 MHF1_0 TAF9_1 TAF9_1 MHF1_1 MHF1_1 Cantr_00370 Cantr_00370 TAF6_0 TAF6_0 HHT3_0 HHT3_0 HAP5 HAP5 taf11_0 taf11_0 HTA1_0 HTA1_0 SPT3 SPT3 SPT7 SPT7 TAF8_0 TAF8_0 ncb2_0 ncb2_0 DPB4_0 DPB4_0 Cantr_02417 Cantr_02417
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cantr_09205Uncharacterized protein. (90 aa)
TAF13Transcription initiation factor TFIID subunit 13. (211 aa)
DPB4_1DNA polymerase epsilon subunit D. (252 aa)
TAF8_1Transcription initiation factor TFIID subunit 8. (475 aa)
ncb2_1Negative cofactor 2 complex subunit beta. (148 aa)
Cantr_04664Uncharacterized protein. (619 aa)
HTA2_0Histone H2A; Belongs to the histone H2A family. (131 aa)
DPB3_0DNA polymerase epsilon subunit C. (251 aa)
HHT1_0Histone H3; Belongs to the histone H3 family. (136 aa)
H4_0Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (105 aa)
taf11_1Transcription initiation factor TFIID subunit 11. (284 aa)
CSE4_1Histone H3-like centromeric protein CSE4. (272 aa)
HTB2_2Histone H2B; Belongs to the histone H2B family. (130 aa)
Cantr_06126TFIID_20kDa domain-containing protein. (526 aa)
TAF6_1Transcription initiation factor TFIID subunit 6. (496 aa)
BUR6Negative cofactor 2 complex subunit alpha. (124 aa)
Cantr_07706Uncharacterized protein. (90 aa)
Cantr_07766TFIID_20kDa domain-containing protein. (797 aa)
NFYB8Nuclear transcription factor Y subunit B-8. (305 aa)
TAF3_0Transcription initiation factor TFIID subunit 3. (367 aa)
HAP3_0Transcriptional activator HAP3. (212 aa)
TAF9_0Transcription initiation factor TFIID subunit 9. (222 aa)
DPB3_1DNA polymerase epsilon subunit C. (259 aa)
HTB2_3Histone H2B; Belongs to the histone H2B family. (130 aa)
HTZ1_1Histone H2A; Belongs to the histone H2A family. (133 aa)
TAF12Transcription initiation factor TFIID subunit 12. (798 aa)
HAP3_1Transcriptional activator HAP3. (214 aa)
TAF3_1Transcription initiation factor TFIID subunit 3. (367 aa)
MHF1_0MHF histone-fold complex subunit 1. (109 aa)
TAF9_1Transcription initiation factor TFIID subunit 9. (220 aa)
MHF1_1MHF histone-fold complex subunit 1. (109 aa)
Cantr_00370TFIID_20kDa domain-containing protein. (527 aa)
TAF6_0Transcription initiation factor TFIID subunit 6. (496 aa)
HHT3_0Histone H3; Belongs to the histone H3 family. (136 aa)
HAP5Transcriptional activator HAP5. (370 aa)
taf11_0Transcription initiation factor TFIID subunit 11. (288 aa)
HTA1_0Histone H2A; Belongs to the histone H2A family. (132 aa)
SPT3Protein SPT3. (341 aa)
SPT7Transcriptional activator SPT7. (1246 aa)
TAF8_0Transcription initiation factor TFIID subunit 8. (481 aa)
ncb2_0Negative cofactor 2 complex subunit beta. (148 aa)
DPB4_0DNA polymerase epsilon subunit D. (253 aa)
Cantr_02417Uncharacterized protein. (617 aa)
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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