STRINGSTRING
Cantr_02718 Cantr_02718 Cantr_04361 Cantr_04361 ISW1 ISW1 Cantr_05694 Cantr_05694 ISW2_1 ISW2_1 thp1_1 thp1_1 thp1_2 thp1_2 HTB2_2 HTB2_2 prp10_0 prp10_0 HTB2_3 HTB2_3 prp10_1 prp10_1 thp1_0 thp1_0 ISW2_0 ISW2_0 mug mug POL5 POL5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cantr_02718Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (401 aa)
Cantr_04361Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (401 aa)
ISW1ISWI chromatin-remodeling complex ATPase ISW1. (812 aa)
Cantr_05694Uncharacterized protein. (152 aa)
ISW2_1ISWI chromatin-remodeling complex ATPase ISW2. (1064 aa)
thp1_1G/U mismatch-specific uracil DNA glycosylase. (261 aa)
thp1_2G/U mismatch-specific uracil DNA glycosylase. (238 aa)
HTB2_2Histone H2B; Belongs to the histone H2B family. (130 aa)
prp10_0U2 snRNP component prp10. (1087 aa)
HTB2_3Histone H2B; Belongs to the histone H2B family. (130 aa)
prp10_1U2 snRNP component prp10. (1087 aa)
thp1_0G/U mismatch-specific uracil DNA glycosylase. (238 aa)
ISW2_0ISWI chromatin-remodeling complex ATPase ISW2. (1064 aa)
mugG/U mismatch-specific DNA glycosylase. (263 aa)
POL5DNA polymerase V. (1036 aa)
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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