STRINGSTRING
SWH1 SWH1 COG4_1 COG4_1 bglI_1 bglI_1 TDA3_0 TDA3_0 ECM38_0 ECM38_0 Cantr_06294 Cantr_06294 Cantr_07332 Cantr_07332 OSH3_0 OSH3_0 ECM38_1 ECM38_1 OSH3_1 OSH3_1 TDA3_1 TDA3_1 Cantr_00203 Cantr_00203 SHM2 SHM2 SHM1_0 SHM1_0 ASP1 ASP1 BGL2_0 BGL2_0 bglI_0 bglI_0 OSH2 OSH2 SHM1_1 SHM1_1 COG4_0 COG4_0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SWH1Oxysterol-binding 1; Belongs to the OSBP family. (1326 aa)
COG4_1Conserved oligomeric Golgi complex subunit 4. (864 aa)
bglI_1Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (835 aa)
TDA3_0Putative oxidoreductase TDA3. (499 aa)
ECM38_0Gamma-glutamyltransferase. (540 aa)
Cantr_06294Uncharacterized protein. (423 aa)
Cantr_07332Uncharacterized protein. (173 aa)
OSH3_0Oxysterol-binding 3; Belongs to the OSBP family. (846 aa)
ECM38_1Gamma-glutamyltransferase. (647 aa)
OSH3_1Oxysterol-binding 3; Belongs to the OSBP family. (845 aa)
TDA3_1Putative oxidoreductase TDA3. (499 aa)
Cantr_00203Uncharacterized protein. (423 aa)
SHM2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (470 aa)
SHM1_0Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (491 aa)
ASP1L-asparaginase 1; Belongs to the asparaginase 1 family. (434 aa)
BGL2_0Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (908 aa)
bglI_0Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (835 aa)
OSH2Oxysterol-binding 2; Belongs to the OSBP family. (1331 aa)
SHM1_1Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (491 aa)
COG4_0Conserved oligomeric Golgi complex subunit 4. (864 aa)
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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