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argT_3 argT_3 hisP_1 hisP_1 hisM hisM hisQ_1 hisQ_1 argT_1 argT_1 artM_6 artM_6 artQ_2 artQ_2 argT_5 argT_5 hisJ_2 hisJ_2 hisQ_2 hisQ_2 artM_3 artM_3 hisP_3 hisP_3 glnQ glnQ glnP glnP glnH glnH artJ artJ artM artM artQ_1 artQ_1 artI_2 artI_2 artP-2 artP-2 hisJ_1 hisJ_1 yxeO yxeO tcyL tcyL fliY_1 fliY_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
argT_3Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
hisP_1Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
hisMAmino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
hisQ_1Amino acid ABC transporter permease; With HisJMP is involved in the transport of histidine/lysine/arginine/ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
argT_1Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
artM_6D-amino-acid oxidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
artQ_2Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
argT_5Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (270 aa)
hisJ_2ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
hisQ_2ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
artM_3ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
hisP_3Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
glnQSimilar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
glnPGlutamine ABC transporter permease GlnP; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
glnHGlutamine ABC transporter substrate-binding protein GlnH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
artJArginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
artMArginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
artQ_1Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (238 aa)
artI_2Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
artP-2Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
hisJ_1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
yxeOL-cystine ABC transporter ATP-binding protein YecC; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
tcyLAmino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
fliY_1Cystine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (266 aa)
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pantoea sp. SL1_M5, Pseudomonas herbicola, bacterium G33-1
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