STRINGSTRING
licR_2 licR_2 AOE41299.1 AOE41299.1 mtlA mtlA fruA_2 fruA_2 fruA_1 fruA_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
licR_2Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)
AOE41299.1PTS lactose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
mtlAPTS mannitol transporter subunit IICBA; Derived by automated computational analysis using gene prediction method: Protein Homology. (644 aa)
fruA_2PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
fruA_1PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
Your Current Organism:
Pantoea agglomerans
NCBI taxonomy Id: 549
Other names: ATCC 27155, Bacillus milletiae, Bacterium herbicola, CCUG 539, CFBP 3845, CIP 57.51, DSM 3493, Enterobacter agglomerans, Erwinia herbicola, Erwinia milletiae, ICMP 12534, ICPB 3435, NBRC 102470, NCTC 9381, P. agglomerans, Pantoea herbicola, Pantoea sp. SL1_M5, Pseudomonas herbicola, bacterium G33-1
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